PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341217.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

DBB

Protein Properties

Length: 294aa MW: 32252 Da PI: 4.7513

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.7	1.7e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC +C ++ H H++vpl XP_027341217.1 4 QCNVCEASEAKVLCCADEAALCWECDEKVHAAnklaskHQRVPL 47 7***999*******************66899999999986 PP
2	zf-B_box	28.5	3.2e-09	54	94	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++kC+ ++e +fC +++ llC++C l++H H XP_027341217.1 54 MPKCDICQEALGYFFCLEDRALLCRKCDLAIHTAntyvsgH 94 799*****9*******************654455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MKIQCNVCEA SEAKVLCCAD EAALCWECDE KVHAANKLAS KHQRVPLSTS SSHMPKCDIC 60 QEALGYFFCL EDRALLCRKC DLAIHTANTY VSGHQRFLLT GVRVGLEATE PGASSTSLKS 120 DSGEKISDTK SSSVSRKVST MPQPSDYNEV LPFDAGLVGE FPPAKVSYGG GSTAGNISQW 180 TIDEFIGLNE FSQNYNYMGG SSRADSGKLG DSDSPVLRSS EEEMEEDDDH LDCVPDSSWT 240 VPQMIPSPPT ASGLYWPKDP QRLSDSVLFV PDICFSQMQQ PQNSSNFLRR RRHL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-85	DBB family protein