PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341133.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 529aa MW: 57999.1 Da PI: 5.0182

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341133.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.8	5.3e-18	38	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+vk++G g+W+++ ++ g+ R++k+c++rw ++l XP_027341133.1 38 KGPWTSAEDAILVDYVKKHGEGNWNAVQKYSGLSRCGKSCRLRWANHL 85 79******************************************9986 PP
2	Myb_DNA-binding	53.7	4.6e-17	91	134	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE++l++++++++G++ W++ a++++ gRt++++k++w++ XP_027341133.1 91 KGAFTPEEEQLIAELHAKMGNK-WARMAAHLP-GRTDNEIKNYWNT 134 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MSQMTDEVKD IMHCNDQIGS QLNDEGNGGS VGGVVLKKGP WTSAEDAILV DYVKKHGEGN 60 WNAVQKYSGL SRCGKSCRLR WANHLRPNLK KGAFTPEEEQ LIAELHAKMG NKWARMAAHL 120 PGRTDNEIKN YWNTRIKRRQ RAGLPLYPPE VCLRALQESQ CGQGTDGIND GDRGHHDFLQ 180 KNNYEIHDAI FDSLKENQGI LPFVPELPDI SAHSILPNGL GSPPYCNFVP STLPNHNHLQ 240 ESTVSLFGSS GMNRNGFYPF DHMKDNPSDN IADSFGLHSP LDPVASSHSS ICHSHSLSNG 300 NSSTSKPISE AVKLELPSLQ YPETEFGSWG TSPPLPLNES VDAFIHSQPP NAIDSGCSSP 360 HNSGLLDALL YQAKTLSCSK NNCSDKSSNS SIATPHESSA LNLYETEWED YADPASSFCA 420 TSILNEHPAV SASGNSWDEW VPFQTYSGNN SKLESVDQVW PPKSENQVIS MLNLSWPDVL 480 LDSDWQEQCS ELGMNQAIVT NAIDDLGDNK HMPSGTFSSS TGGCFLRMD

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MSQMTDEVKD IMHCNDQIGS QLNDEGNGGS VGGVVLKKGP WTSAEDAILV DYVKKHGEGN  60
WNAVQKYSGL SRCGKSCRLR WANHLRPNLK KGAFTPEEEQ LIAELHAKMG NKWARMAAHL  120
PGRTDNEIKN YWNTRIKRRQ RAGLPLYPPE VCLRALQESQ CGQGTDGIND GDRGHHDFLQ  180
KNNYEIHDAI FDSLKENQGI LPFVPELPDI SAHSILPNGL GSPPYCNFVP STLPNHNHLQ  240
ESTVSLFGSS GMNRNGFYPF DHMKDNPSDN IADSFGLHSP LDPVASSHSS ICHSHSLSNG  300
NSSTSKPISE AVKLELPSLQ YPETEFGSWG TSPPLPLNES VDAFIHSQPP NAIDSGCSSP  360
HNSGLLDALL YQAKTLSCSK NNCSDKSSNS SIATPHESSA LNLYETEWED YADPASSFCA  420
TSILNEHPAV SASGNSWDEW VPFQTYSGNN SKLESVDQVW PPKSENQVIS MLNLSWPDVL  480
LDSDWQEQCS ELGMNQAIVT NAIDDLGDNK HMPSGTFSSS TGGCFLRMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11440.1	1e-106	MYB family protein