PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341081.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 495aa    MW: 55596.3 Da    PI: 7.576
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.61.9e-1301244941373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+s+++++  ++l+ + ++++s +gdp+qRl ay++e+L ar   s++++y+al+++e +    +e l++++l++e++P+lkf++
  XP_027341081.1 124 LKQLLIACAKALSENNMKDFDQLVGKARNTVSINGDPIQRLGAYMVEGLVARKEASGNSIYHALRCREPE---GIELLSYMQLLFEICPYLKFGY 215
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     ++aN aI ea  +e+++HiiDf+i qG QW++LlqaLa+Rp+g+p++RiTg+++p s+     + le +g+rLa + e++g+p+ef+  v     
  XP_027341081.1 216 MAANGAIAEACRNEDHIHIIDFQIAQGSQWMTLLQALAARPGGAPRVRITGIDDPVSKyarGGDGLEVVGKRLALMSEKFGIPVEFHG-VPVFAP 309
                     *******************************************************99999999*************************.688899 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d++ e+L+++pgEalaVn+ lqlh++ desv+++++rd +L+lvkslsPkv ++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+s++r
  XP_027341081.1 310 DVRREMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNSKDR 404
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     i+vE+++l+r+ivn++aceg+er+erhe ++kW++rl++aGF++ pls+++++ +++ll+ ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_027341081.1 405 INVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLKCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 494
                     ***********************************************************9998.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 495 aa     Download sequence    
MHRSISSVDS LKDSFPLYSA RNTLQQNASC NQKIKHVLLE LESALMAPDD DEVTTPNTLG  60
ESNRPMTSGR RFRSWSHEHQ GSQYTQNQPS YATSSRQSSE VVQAEKRQKL MEESSLQGLP  120
SKNLKQLLIA CAKALSENNM KDFDQLVGKA RNTVSINGDP IQRLGAYMVE GLVARKEASG  180
NSIYHALRCR EPEGIELLSY MQLLFEICPY LKFGYMAANG AIAEACRNED HIHIIDFQIA  240
QGSQWMTLLQ ALAARPGGAP RVRITGIDDP VSKYARGGDG LEVVGKRLAL MSEKFGIPVE  300
FHGVPVFAPD VRREMLDIRP GEALAVNFPL QLHHTADESV DVNNPRDGLL RLVKSLSPKV  360
TTLVEQESNT NTTPFFNRFI ETLDYYLAIF ESIDVTLPRN SKDRINVEQH CLARDIVNII  420
ACEGKERVER HELFGKWKSR LTMAGFRQCP LSSYVNSVIR SLLKCYSEHY TLVEKDGAML  480
LGWKNRNLIS ASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-176GRAS family protein