PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341080.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 584aa    MW: 65304 Da    PI: 6.7165
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341080.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS425.93.2e-1302135831373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+s+++++  ++l+ + ++++s +gdp+qRl ay++e+L ar   s++++y+al+++e +    +e l++++l++e++P+lkf++
  XP_027341080.1 213 LKQLLIACAKALSENNMKDFDQLVGKARNTVSINGDPIQRLGAYMVEGLVARKEASGNSIYHALRCREPE---GIELLSYMQLLFEICPYLKFGY 304
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrle 187
                     ++aN aI ea  +e+++HiiDf+i qG QW++LlqaLa+Rp+g+p++RiTg+++p s+     + le +g+rLa + e++g+p+ef+  v     
  XP_027341080.1 305 MAANGAIAEACRNEDHIHIIDFQIAQGSQWMTLLQALAARPGGAPRVRITGIDDPVSKyarGGDGLEVVGKRLALMSEKFGIPVEFHG-VPVFAP 398
                     *******************************************************99999999*************************.688899 PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d++ e+L+++pgEalaVn+ lqlh++ desv+++++rd +L+lvkslsPkv ++veqe+++n+++F++rf+e+l+yy a+f+s++++lpr+s++r
  XP_027341080.1 399 DVRREMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNSKDR 493
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     i+vE+++l+r+ivn++aceg+er+erhe ++kW++rl++aGF++ pls+++++ +++ll+ ++ + y++ e++g+++lgWk+r+L+s+SaW
  XP_027341080.1 494 INVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLKCYS-EHYTLVEKDGAMLLGWKNRNLISASAW 583
                     ***********************************************************9998.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    
MDSQQLFSYG VTSAELPYMS SFPTIPSLPN RFLGSLKFDS GNSPNSPFST HFDSDTLSAL  60
SDNLEQRSPG EILSGVSPFC NSLLETNHYM HRSISSVDSL KDSFPLYSAR NTLQQNASCN  120
QKIKHVLLEL ESALMAPDDD EVTTPNTLGE SNRPMTSGRR FRSWSHEHQG SQYTQNQPSY  180
ATSSRQSSEV VQAEKRQKLM EESSLQGLPS KNLKQLLIAC AKALSENNMK DFDQLVGKAR  240
NTVSINGDPI QRLGAYMVEG LVARKEASGN SIYHALRCRE PEGIELLSYM QLLFEICPYL  300
KFGYMAANGA IAEACRNEDH IHIIDFQIAQ GSQWMTLLQA LAARPGGAPR VRITGIDDPV  360
SKYARGGDGL EVVGKRLALM SEKFGIPVEF HGVPVFAPDV RREMLDIRPG EALAVNFPLQ  420
LHHTADESVD VNNPRDGLLR LVKSLSPKVT TLVEQESNTN TTPFFNRFIE TLDYYLAIFE  480
SIDVTLPRNS KDRINVEQHC LARDIVNIIA CEGKERVERH ELFGKWKSRL TMAGFRQCPL  540
SSYVNSVIRS LLKCYSEHYT LVEKDGAMLL GWKNRNLISA SAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-174GRAS family protein