PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027340932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MYB | ||||||||
Protein Properties | Length: 378aa MW: 42922.6 Da PI: 4.612 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48 | 2.9e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl XP_027340932.1 16 RGPWSPAEDLKLIAFIQKFGHENWRALPKQAGLLRCGKSCRLRWINYL 63 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e +++++k lG++ W++Ia++++ gRt++++k+ w+++l XP_027340932.1 69 RGNFTPEEEETIIRLHKALGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MGKGRAPCCD KTQVKRGPWS PAEDLKLIAF IQKFGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTPEEEETI IRLHKALGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLVA 120 KKSSESSGDE SKTESSITSS SSSSSSESFF SNERPNQAKT PTSGNVFNDQ ASQETMTDKI 180 EHDSEKQVSN EVIDIITTED PKESSVSLSS VESNILNSSQ IVAYNKPEPQ LASPLLTYVG 240 PYDVDSTLEE VDKPNHLIEI PWESDYDFWK LLDENLGSFQ SNEVQLGEFQ ASQNMILEEV 300 SVHDDEAKKW SQDLENEFGV VGEIKESNKD PFPPKNYAVE PEMDHPQTFD FDDMTRPESE 360 LDFGYIQLWP SWPQNTTL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 1e-76 | MYB family protein |