PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340740.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 762aa    MW: 82625.7 Da    PI: 5.8682
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340740.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.31.7e-2091146156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  XP_027340740.1  91 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 146
                     688999***********************************************999 PP
2START216.59e-682835031206
                     HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     ela +a++el+ +a+ +ep+W +      + +n++e++++f+++ +     ++ ea+r+++vv+m++ +lve+l+d++ qW++ +     +a+tl
  XP_027340740.1 283 ELAVAAMEELIGMAQMGEPLWLTTLdgttTLLNEEEYIRSFPRGIGpkpagFKCEASRETAVVIMNHINLVEILMDVN-QWSTVFSgivsRAMTL 376
                     57899********************999999************999********************************.**************** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     ev+s+g      galq+m+aelq++splvp R+++fvRy++q+g+g+w++vdvS+d+ ++ p    ++R++++pSg+li++++ng+skv+wve+v
  XP_027340740.1 377 EVLSTGvagnynGALQVMTAELQVPSPLVPtRESYFVRYCKQHGEGTWAVVDVSLDNLRPSP----SARCRRRPSGCLIQEMPNGYSKVIWVENV 467
                     ************************************************************99....5**************************** PP

                     E--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                     ++++r +h+l+++lv+sg+a+gak+w atl+rqce+
  XP_027340740.1 468 EVDDRGVHNLYKQLVSSGHAFGAKRWIATLDRQCER 503
                     **********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 762 aa     Download sequence    
MPAGIMIPAR NMPSMIGRNG NVGGFGLSSG LSLGQPNLME AGQLHPLDMP QNTSESDVPR  60
IREDDFDTAT KSGSENQEGA SGEDQDPRPK KKRYHRHTQH QIQEMEAFFK ECPHPDDKQR  120
KELSRELGLE PLQVKFWFQN KRTQMKTQHE RHENTQLRSE NEKLRADNMR FREALSNASC  180
PNCGGPTAIG EMSFDEHHLR LENARLREEI DRISAIAAKY VGKPVVSYPL LSPSSVPPRP  240
LELGIGGFGG QPGIGGGDIY GGAGDLLRPV SGPTEADKPI IIELAVAAME ELIGMAQMGE  300
PLWLTTLDGT TTLLNEEEYI RSFPRGIGPK PAGFKCEASR ETAVVIMNHI NLVEILMDVN  360
QWSTVFSGIV SRAMTLEVLS TGVAGNYNGA LQVMTAELQV PSPLVPTRES YFVRYCKQHG  420
EGTWAVVDVS LDNLRPSPSA RCRRRPSGCL IQEMPNGYSK VIWVENVEVD DRGVHNLYKQ  480
LVSSGHAFGA KRWIATLDRQ CERLASAMAT NVPTVDVGVI TNQDGRKSML KLAERMVISF  540
CAGVSASTAH TWTTLSGTGA DDVRVMTRKS VDDPGRPPGI VLSAATSFWL PVSPKRVFEF  600
LRDENSRSEW DILSNGGVVQ EMAHIANGRD TGNCVSLLRV NSANSSQSNM LILQESCTDT  660
TGSFVIYAPV DIVAMNVVLN GGDPDYVALL PSGFAILPDG TTTHGGGIGD TGHGGSLLTV  720
AFQILVDSVP TAKLSLGSVA TVNNLIACTV ERIKASLSGE VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0HD-ZIP family protein