PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340337.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 707aa MW: 77649.8 Da PI: 8.0782

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340337.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	75.7	5.2e-24	111	212	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ +++ + t++ +d +g++W++++iyr++++r++lt+GW++Fv++++L +gD++vF + + XP_027340337.1 111 FAKTLTQSDANNGGGFSVPRYCAETIfprldysAEPPVQ--TVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFL--RAE 201 89**************************986445444..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_027340337.1 202 NGDLCVGIRRA 212 8999**997 PP
2	Auxin_resp	115.8	3.8e-38	284	367	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 a++ a+t+++FevvY+Prast+eF+++++ v++a++++++ GmRfkm fetedss++++ +Gt+++v+ +dpvrWpnS+Wr+L+ XP_027340337.1 284 AVTLAATNQAFEVVYYPRASTPEFCIRTSAVRAAMRIQWCSGMRFKMPFETEDSSRISWfMGTIASVQVVDPVRWPNSPWRLLQ 367 67899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MKEGEKSLDP QLWHACAGSM VQMPLVNSKV FYFPQGHAEH AHCNVDFGAS LRIPPFILCR 60 VAAVKFLADP ETDEVFARIR LVPLRNSELD YEDGDALDGN ASQGSEKPAS FAKTLTQSDA 120 NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VIAKDVHGEV WKFRHIYRGT PRRHLLTTGW 180 SSFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIVGGS EGPSGWSSGG GSCGLGPYGA 240 FSAFLREESK VLRNGCGNSG LSPGGGGGGV SGRAKVSAES VREAVTLAAT NQAFEVVYYP 300 RASTPEFCIR TSAVRAAMRI QWCSGMRFKM PFETEDSSRI SWFMGTIASV QVVDPVRWPN 360 SPWRLLQVTW DEPDLLHNVK RVSPWLVELV SNVPIIHLTP FSPPRKKLRF PQHPDFPLDV 420 QFPIPTFSGN PVGSSTSSPL CCLSDNAPAG IQGARHAQIG ISLSDLHLNN KLQLGLLPTN 480 VHHLDLHTGI SNGNTTNHDK SKESLSCLLT MGNSHKNLEK SDNAKRHQFW LFGQPILTEQ 540 QIFRSSSSDM SSQNCTGKNS PCDESKDKKN GFFSDSQSSI SPSTAEFSWQ LGLDNGHCKV 600 FMESEDVGRT LDLSRLGSYE ELYMRLAKMF GIERSEMLSH VLYRDATGAI KQTGEEPFSE 660 FMKTAKRLTI LMDSGNKDNR RVWITGTRNA ERGLDASNKA GPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MKEGEKSLDP QLWHACAGSM VQMPLVNSKV FYFPQGHAEH AHCNVDFGAS LRIPPFILCR  60
VAAVKFLADP ETDEVFARIR LVPLRNSELD YEDGDALDGN ASQGSEKPAS FAKTLTQSDA  120
NNGGGFSVPR YCAETIFPRL DYSAEPPVQT VIAKDVHGEV WKFRHIYRGT PRRHLLTTGW  180
SSFVNQKKLV AGDSIVFLRA ENGDLCVGIR RAKRGIVGGS EGPSGWSSGG GSCGLGPYGA  240
FSAFLREESK VLRNGCGNSG LSPGGGGGGV SGRAKVSAES VREAVTLAAT NQAFEVVYYP  300
RASTPEFCIR TSAVRAAMRI QWCSGMRFKM PFETEDSSRI SWFMGTIASV QVVDPVRWPN  360
SPWRLLQVTW DEPDLLHNVK RVSPWLVELV SNVPIIHLTP FSPPRKKLRF PQHPDFPLDV  420
QFPIPTFSGN PVGSSTSSPL CCLSDNAPAG IQGARHAQIG ISLSDLHLNN KLQLGLLPTN  480
VHHLDLHTGI SNGNTTNHDK SKESLSCLLT MGNSHKNLEK SDNAKRHQFW LFGQPILTEQ  540
QIFRSSSSDM SSQNCTGKNS PCDESKDKKN GFFSDSQSSI SPSTAEFSWQ LGLDNGHCKV  600
FMESEDVGRT LDLSRLGSYE ELYMRLAKMF GIERSEMLSH VLYRDATGAI KQTGEEPFSE  660
FMKTAKRLTI LMDSGNKDNR RVWITGTRNA ERGLDASNKA GPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein