PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027340063.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | NF-X1 | ||||||||
Protein Properties | Length: 1064aa MW: 115590 Da PI: 7.965 | ||||||||
Description | NF-X1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-NF-X1 | 24.9 | 4.3e-08 | 251 | 269 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+++CH+GpC+pC+ XP_027340063.1 251 CGRHRCERICHLGPCDPCQ 269 ******************6 PP | |||||||
2 | zf-NF-X1 | 16.7 | 1.6e-05 | 315 | 332 | 1 | 18 |
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C++ CH+G C++C XP_027340063.1 315 CGNHICIESCHPGSCGEC 332 ****************** PP | |||||||
3 | zf-NF-X1 | 18.9 | 3.2e-06 | 469 | 487 | 1 | 19 |
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++lCH+G CppC XP_027340063.1 469 CGQHACESLCHTGHCPPCL 487 ******************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1064 aa Download sequence |
MSSQERNQRR DRSRVSRQEW IPRVSTVTAD QSQNGEAVGS SNPTIRHRRS RPVPKNHVHK 60 GLVLKDSDLP QLLQEIQDKL TKGAVECMIC YDMVRRSAPI WSCASCYSIF HLNCIKKWAR 120 APTSVDLSVE KNQGFNWRCP GCQSVQLTSS KEIRYLCFCG KRPDPPSDLY LTPHSCGEPC 180 GKPLERELGG NMEDLCPHVC VLQCHPGPCP PCKAFAPPRM CPCGKKNITT RCADRQSVLT 240 CGQPCEKLLE CGRHRCERIC HLGPCDPCQV PINASCFCSK NMEVILCGEM AVKGEIIAEG 300 GVFSCGSTCG KKLSCGNHIC IESCHPGSCG ECDLLPSHVK TCYCGKTRLE VERQSCLDPI 360 PTCSQVCGRS LPCGIHHCKE ACHAGECSPC LVLVSQKCRC GSTSRTVECC KTTMESEKFT 420 CEKPCGQKKK CGRHRCSERC CPLSNPNNIR NVEWDPHFCS MPCGKKLRCG QHACESLCHT 480 GHCPPCLETI FTDLTCACGQ TSIPPPLPCG TPPPSCQLPC SVPQPCSHPA SHSCHFGDCP 540 PCSVPVAKEC IGGHVVLRNI PCGSKDIRCN KLCGKTRQCG LHACGRTCHP SPCDNPSAAQ 600 GTRASCGQTC GAPRRDCRHT CTAPCHPSTP CPDIRCEFPV TITCSCGRIT ANVPCDAGGS 660 CANYNADAVH EASIIQKMPV QFQPVAANGK KVPLGQRKLM CNDECAKLER KKVLADAFEI 720 TTPNMDSLHF GENSVASELI ADMLRRDPKW VLSVEERCKF LVLGKSRGTT HGLKVHVFCP 780 MMKDKTDSVR VIAERWRLAV NAAGREPKRF VVVHVTPKSR PPPRVLGVKG TTTVNVPLPP 840 AFDPLVDMDP RLVVSFLDLP RDADISALVL RFGGECELVW LNDKNALAVF NDPARAATAM 900 RRLEHGTVYQ GAVVVVPNVG ASVTSSATNA WGGSGSMKGG GALAALKGNP WKKAVVQEPG 960 WREDSWGDEE WATGSDNVQS SIWKKEAPPI SASLNPWSVL DQESSSRSSV AAVKTDVSRK 1020 HSESSAVTKL EPHDGGSNLE GRHAVNLDAL EASDVVDDWE QACE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10170.1 | 0.0 | NF-X1 family protein |