PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340062.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

NF-X1

Protein Properties

Length: 1064aa MW: 115590 Da PI: 7.965

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	24.9	4.3e-08	251	269	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+++CH+GpC+pC+ XP_027340062.1 251 CGRHRCERICHLGPCDPCQ 269 ******************6 PP
2	zf-NF-X1	16.7	1.6e-05	315	332	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C++ CH+G C++C XP_027340062.1 315 CGNHICIESCHPGSCGEC 332 ****************** PP
3	zf-NF-X1	18.9	3.2e-06	469	487	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H C++lCH+G CppC XP_027340062.1 469 CGQHACESLCHTGHCPPCL 487 ******************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1064 aa Download sequence
MSSQERNQRR DRSRVSRQEW IPRVSTVTAD QSQNGEAVGS SNPTIRHRRS RPVPKNHVHK 60 GLVLKDSDLP QLLQEIQDKL TKGAVECMIC YDMVRRSAPI WSCASCYSIF HLNCIKKWAR 120 APTSVDLSVE KNQGFNWRCP GCQSVQLTSS KEIRYLCFCG KRPDPPSDLY LTPHSCGEPC 180 GKPLERELGG NMEDLCPHVC VLQCHPGPCP PCKAFAPPRM CPCGKKNITT RCADRQSVLT 240 CGQPCEKLLE CGRHRCERIC HLGPCDPCQV PINASCFCSK NMEVILCGEM AVKGEIIAEG 300 GVFSCGSTCG KKLSCGNHIC IESCHPGSCG ECDLLPSHVK TCYCGKTRLE VERQSCLDPI 360 PTCSQVCGRS LPCGIHHCKE ACHAGECSPC LVLVSQKCRC GSTSRTVECC KTTMESEKFT 420 CEKPCGQKKK CGRHRCSERC CPLSNPNNIR NVEWDPHFCS MPCGKKLRCG QHACESLCHT 480 GHCPPCLETI FTDLTCACGQ TSIPPPLPCG TPPPSCQLPC SVPQPCSHPA SHSCHFGDCP 540 PCSVPVAKEC IGGHVVLRNI PCGSKDIRCN KLCGKTRQCG LHACGRTCHP SPCDNPSAAQ 600 GTRASCGQTC GAPRRDCRHT CTAPCHPSTP CPDIRCEFPV TITCSCGRIT ANVPCDAGGS 660 CANYNADAVH EASIIQKMPV QFQPVAANGK KVPLGQRKLM CNDECAKLER KKVLADAFEI 720 TTPNMDSLHF GENSVASELI ADMLRRDPKW VLSVEERCKF LVLGKSRGTT HGLKVHVFCP 780 MMKDKTDSVR VIAERWRLAV NAAGREPKRF VVVHVTPKSR PPPRVLGVKG TTTVNVPLPP 840 AFDPLVDMDP RLVVSFLDLP RDADISALVL RFGGECELVW LNDKNALAVF NDPARAATAM 900 RRLEHGTVYQ GAVVVVPNVG ASVTSSATNA WGGSGSMKGG GALAALKGNP WKKAVVQEPG 960 WREDSWGDEE WATGSDNVQS SIWKKEAPPI SASLNPWSVL DQESSSRSSV AAVKTDVSRK 1020 HSESSAVTKL EPHDGGSNLE GRHAVNLDAL EASDVVDDWE QACE

Sequence ? help Back to Top

Protein Sequence Length: 1064 aa Download sequence

MSSQERNQRR DRSRVSRQEW IPRVSTVTAD QSQNGEAVGS SNPTIRHRRS RPVPKNHVHK  60
GLVLKDSDLP QLLQEIQDKL TKGAVECMIC YDMVRRSAPI WSCASCYSIF HLNCIKKWAR  120
APTSVDLSVE KNQGFNWRCP GCQSVQLTSS KEIRYLCFCG KRPDPPSDLY LTPHSCGEPC  180
GKPLERELGG NMEDLCPHVC VLQCHPGPCP PCKAFAPPRM CPCGKKNITT RCADRQSVLT  240
CGQPCEKLLE CGRHRCERIC HLGPCDPCQV PINASCFCSK NMEVILCGEM AVKGEIIAEG  300
GVFSCGSTCG KKLSCGNHIC IESCHPGSCG ECDLLPSHVK TCYCGKTRLE VERQSCLDPI  360
PTCSQVCGRS LPCGIHHCKE ACHAGECSPC LVLVSQKCRC GSTSRTVECC KTTMESEKFT  420
CEKPCGQKKK CGRHRCSERC CPLSNPNNIR NVEWDPHFCS MPCGKKLRCG QHACESLCHT  480
GHCPPCLETI FTDLTCACGQ TSIPPPLPCG TPPPSCQLPC SVPQPCSHPA SHSCHFGDCP  540
PCSVPVAKEC IGGHVVLRNI PCGSKDIRCN KLCGKTRQCG LHACGRTCHP SPCDNPSAAQ  600
GTRASCGQTC GAPRRDCRHT CTAPCHPSTP CPDIRCEFPV TITCSCGRIT ANVPCDAGGS  660
CANYNADAVH EASIIQKMPV QFQPVAANGK KVPLGQRKLM CNDECAKLER KKVLADAFEI  720
TTPNMDSLHF GENSVASELI ADMLRRDPKW VLSVEERCKF LVLGKSRGTT HGLKVHVFCP  780
MMKDKTDSVR VIAERWRLAV NAAGREPKRF VVVHVTPKSR PPPRVLGVKG TTTVNVPLPP  840
AFDPLVDMDP RLVVSFLDLP RDADISALVL RFGGECELVW LNDKNALAVF NDPARAATAM  900
RRLEHGTVYQ GAVVVVPNVG ASVTSSATNA WGGSGSMKGG GALAALKGNP WKKAVVQEPG  960
WREDSWGDEE WATGSDNVQS SIWKKEAPPI SASLNPWSVL DQESSSRSSV AAVKTDVSRK  1020
HSESSAVTKL EPHDGGSNLE GRHAVNLDAL EASDVVDDWE QACE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein