PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027339958.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 304aa MW: 34272.9 Da PI: 5.0798 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.7e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +v+++G +W+ +r g+ R++k+c++rw++yl XP_027339958.1 14 KGTWTPEEDKKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYL 61 799*****************99************************97 PP | |||||||
2 | Myb_DNA-binding | 59.1 | 9.7e-19 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e ++++++lG++ W+ Ia +++ gRt++++k++w++ XP_027339958.1 67 RGNFTEEEEETVIKLHEKLGNK-WSIIATHLP-GRTDNEIKNHWHTT 111 89********************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 304 aa Download sequence |
MVRTPSSDKS GLKKGTWTPE EDKKLIAYVT RYGCWNWRQL PRFAGLARCG KSCRLRWLNY 60 LRPNIKRGNF TEEEEETVIK LHEKLGNKWS IIATHLPGRT DNEIKNHWHT TLKKRFGKDR 120 GTESNDSESM KQGKDSVQNN DSSPSTSKTS CDPLSPQLSS SQFSSTPSAS TTGATSEIGL 180 NFMDACTEDV NENMWIESCL TEIIGDGNFQ GSDTRGTPDT WELSPPSSSS ENLVMENDHF 240 AFLEATQPTT YCWTQPYVVD LSHVPNELLA PLANESDQQY FSPMYDADLW CPSNSHDLHV 300 SLFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G79180.1 | 1e-56 | MYB family protein |