PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339703.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 659aa MW: 73334.7 Da PI: 6.0796

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339703.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.5	2.3e-22	119	219	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_027339703.1 119 FCKTLTASDTSTHGGFSVLRRHADDClppldmtQQPPWQ--ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGE 209 99**************************975444444..8********************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_027339703.1 210 NGELRVGVRR 219 999***97 PP
2	Auxin_resp	111.4	8.6e-37	245	327	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+++++err+sGt+vgv d +++ W +S+WrsLk XP_027339703.1 245 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVWADSEWRSLK 327 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MASAAAAGAT NDALYKELWH ACAGPLVTLP REGERVYYFP QGHMEQLEAS MNQGLEQQMP 60 SFNLPSKILC KVVNVHLRAE PETDEVYAQI TLLPEADQSE VTSLDEALPE PPRCTVHSFC 120 KTLTASDTST HGGFSVLRRH ADDCLPPLDM TQQPPWQELV ATDLHGNEWH FRHIFRGQPR 180 RHLLTTGWSV FVSSKKLVAG DAFIFLRGEN GELRVGVRRL MRQQSNMPSS VISSHSMHLG 240 VLATASHAIA TGTLFSVFYK PRTSRSEFIV SVNKYLEARS HKLSVGMRFK MRFEGDEVPE 300 RRFSGTIVGV GDNKSSVWAD SEWRSLKVQW DEPSSILRPD RVSPWELEPL MSTPPTNSQP 360 SQRNKRPRPP VLPSAMPDSS LQGVWKSPVY RDPQHGQDLY PSSKFNSTAT SFLGFGGNCS 420 ASNMSTYWSS AMEKTTESFS PVAIKESGEK RQGTGNGCRL FGIQLLENSS AEETLPTFAL 480 SGRVGDDRSL PSLDAESDQL SEPSNVNRSD IPSVSCDAEK SCLRSPQESQ SRHIRSCTKV 540 HMQGMAVGRA VDLTRFDGYE DLLRKLEEMF DIKGELCGST KKWQVVYTDN EDDMMMVGDD 600 PWLEFCSVVR KIFIYTTEEV KKLSPKIGLP INDEVKPSKM DSDAVVNPED QSSIVGPGC

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MASAAAAGAT NDALYKELWH ACAGPLVTLP REGERVYYFP QGHMEQLEAS MNQGLEQQMP  60
SFNLPSKILC KVVNVHLRAE PETDEVYAQI TLLPEADQSE VTSLDEALPE PPRCTVHSFC  120
KTLTASDTST HGGFSVLRRH ADDCLPPLDM TQQPPWQELV ATDLHGNEWH FRHIFRGQPR  180
RHLLTTGWSV FVSSKKLVAG DAFIFLRGEN GELRVGVRRL MRQQSNMPSS VISSHSMHLG  240
VLATASHAIA TGTLFSVFYK PRTSRSEFIV SVNKYLEARS HKLSVGMRFK MRFEGDEVPE  300
RRFSGTIVGV GDNKSSVWAD SEWRSLKVQW DEPSSILRPD RVSPWELEPL MSTPPTNSQP  360
SQRNKRPRPP VLPSAMPDSS LQGVWKSPVY RDPQHGQDLY PSSKFNSTAT SFLGFGGNCS  420
ASNMSTYWSS AMEKTTESFS PVAIKESGEK RQGTGNGCRL FGIQLLENSS AEETLPTFAL  480
SGRVGDDRSL PSLDAESDQL SEPSNVNRSD IPSVSCDAEK SCLRSPQESQ SRHIRSCTKV  540
HMQGMAVGRA VDLTRFDGYE DLLRKLEEMF DIKGELCGST KKWQVVYTDN EDDMMMVGDD  600
PWLEFCSVVR KIFIYTTEEV KKLSPKIGLP INDEVKPSKM DSDAVVNPED QSSIVGPGC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	365	369	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.2	0.0	ARF family protein