PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339467.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 210aa    MW: 24184.4 Da    PI: 9.3743
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.13e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  XP_027339467.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59
                    8***********************************************86 PP

2K-box83.54.7e-2883172998
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                      e++ +++l+qe a+L k+ie L+ ++R+llGe+L+s+sl+eLqq+e+qLe+s++++R++Kn+++++qie+l++kek l  en +L++++
  XP_027339467.1  83 DEQNMQQHLKQETANLMKKIELLEASKRKLLGEGLGSCSLEELQQIEEQLERSVSSVRARKNQVYKDQIEQLKEKEKTLLAENAKLSEQY 172
                     5677789*******************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS  60
SMQETIERYR RHNRSAQTIH RSDEQNMQQH LKQETANLMK KIELLEASKR KLLGEGLGSC  120
SLEELQQIEE QLERSVSSVR ARKNQVYKDQ IEQLKEKEKT LLAENAKLSE QYGIPPQPAT  180
WDQRENQPYA ESSPSSDVET ELFIGLPRSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.12e-77MIKC_MADS family protein