PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027339466.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 178aa MW: 20683.6 Da PI: 9.9978 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.6 | 2.2e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_027339466.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 79.9 | 6.2e-27 | 79 | 159 | 6 | 86 |
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkeke 86 + +e+++++l+qe a+L k+ie L+ ++R+llGe+L+s+sl+eLqq+e+qLe+s++++R++Kn+++++qie+l++k + XP_027339466.1 79 IHRSDEQNMQHLKQETANLMKKIELLEASKRKLLGEGLGSCSLEELQQIEEQLERSVSSVRARKNQVYKDQIEQLKEKDPQ 159 344899***********************************************************************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQETIERYR RHNRSAQTIH RSDEQNMQHL KQETANLMKK IELLEASKRK LLGEGLGSCS 120 LEELQQIEEQ LERSVSSVRA RKNQVYKDQI EQLKEKDPQK DASVYFFSKE IEGKNPTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 5e-68 | MIKC_MADS family protein |