PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339338.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 521aa MW: 58653.2 Da PI: 7.8298

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339338.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.9	1.3e-11	335	379	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N+ f+ Lr llP+ +K +Ka+iL+ A e ++sL XP_027339338.1 335 HMISERRRREKLNENFQALRALLPPG-----TKKDKASILTTAKETLSSL 379 8899******************97.....8*********9999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MEGVFSLPVA ARTDFIHSLV QSFGCSYICL WEYDSISPNR LSFLDGFYNV RNNQPSSSLG 60 TVPQRLFNQF RSLTFDVNDD RVPGLAFRNQ RPYVELQQLE LLRLASTEIQ AQFFQEARIK 120 TAVFMGCNKG EIELGFLNMS QVDIQAALRS LFPEDFSRQS QQIDQNPPSS SSSSLRSIST 180 GSPEYSSLLF SIPATSQSHF PETLGGVVPP MQPVPNTATS QHHQAIQALA QVVPPTQFPT 240 SENDAIMRAI LHVLSPPSSH QHQNLPYASV VHPEASAFQR YRPDLGPNMT PQMGSNFRRQ 300 SLMNRSFAFF RSLNFMRMRE RIQATSRPTN TQLHHMISER RRREKLNENF QALRALLPPG 360 TKKDKASILT TAKETLSSLM AEVDKLSKRN QELTSILPAK ESTTTAETMA SLSSNERLNV 420 RVSHVPESSS SEERMVDLQV NVRGQISQID ILISLLEFLK RVHHVNLASM DANTHNIGEG 480 NALHRLTFRL SIIQGSEWDE AGFQEAVRRV VADFLQNQVD H

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MEGVFSLPVA ARTDFIHSLV QSFGCSYICL WEYDSISPNR LSFLDGFYNV RNNQPSSSLG  60
TVPQRLFNQF RSLTFDVNDD RVPGLAFRNQ RPYVELQQLE LLRLASTEIQ AQFFQEARIK  120
TAVFMGCNKG EIELGFLNMS QVDIQAALRS LFPEDFSRQS QQIDQNPPSS SSSSLRSIST  180
GSPEYSSLLF SIPATSQSHF PETLGGVVPP MQPVPNTATS QHHQAIQALA QVVPPTQFPT  240
SENDAIMRAI LHVLSPPSSH QHQNLPYASV VHPEASAFQR YRPDLGPNMT PQMGSNFRRQ  300
SLMNRSFAFF RSLNFMRMRE RIQATSRPTN TQLHHMISER RRREKLNENF QALRALLPPG  360
TKKDKASILT TAKETLSSLM AEVDKLSKRN QELTSILPAK ESTTTAETMA SLSSNERLNV  420
RVSHVPESSS SEERMVDLQV NVRGQISQID ILISLLEFLK RVHHVNLASM DANTHNIGEG  480
NALHRLTFRL SIIQGSEWDE AGFQEAVRRV VADFLQNQVD H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	339	344	ERRRRE
2	340	345	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	1e-65	bHLH family protein