PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339242.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 433aa MW: 47468.5 Da PI: 8.1241

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.7	3.1e-11	361	405	6	54
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++Er RR ri ++ +L++l Pk+ +k s a++L ++veYIk+L XP_027339242.1 361 SIAERERRTRISARIKKLQDLFPKS----DKQTSTADMLDLVVEYIKDL 405 689*******************9....788*************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MSVMYSHAVK YSERDTKMDS EMGSNIGHSQ ERCHQHNSGL MRYRSAPSSL LTSLLEDDNN 60 NIGGVNDEAF RSEHHQHQQQ HYPSSTSSEM ETMLARLVSS NNGLSNLEPS AVKQEAGDSV 120 SQQHNGYSYG SSSQLLYQPQ QPNGSLGAFD DGSFSALSSI ASSHNSTQTK MGTSTNCSNL 180 VRQKSSPAGF FNSFSVDNAL REVGSFRACD VTNGQAITST SGLHGTLNFS SRPSSCSSRM 240 PQIAENGHEG LEANCVENRN LGNDNASTKC YMPSFTSNMW DDSTFSAPKT ATNNGEIVFS 300 TSHVLDTQGV DFGYQKVGLT HHLSLPSSSS KMATMEKIFQ IQGSVPCKIR AKRGFATHPR 360 SIAERERRTR ISARIKKLQD LFPKSDKQTS TADMLDLVVE YIKDLKKQVK ILADTRAKCT 420 CTSNQKQYSR PCA

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MSVMYSHAVK YSERDTKMDS EMGSNIGHSQ ERCHQHNSGL MRYRSAPSSL LTSLLEDDNN  60
NIGGVNDEAF RSEHHQHQQQ HYPSSTSSEM ETMLARLVSS NNGLSNLEPS AVKQEAGDSV  120
SQQHNGYSYG SSSQLLYQPQ QPNGSLGAFD DGSFSALSSI ASSHNSTQTK MGTSTNCSNL  180
VRQKSSPAGF FNSFSVDNAL REVGSFRACD VTNGQAITST SGLHGTLNFS SRPSSCSSRM  240
PQIAENGHEG LEANCVENRN LGNDNASTKC YMPSFTSNMW DDSTFSAPKT ATNNGEIVFS  300
TSHVLDTQGV DFGYQKVGLT HHLSLPSSSS KMATMEKIFQ IQGSVPCKIR AKRGFATHPR  360
SIAERERRTR ISARIKKLQD LFPKSDKQTS TADMLDLVVE YIKDLKKQVK ILADTRAKCT  420
CTSNQKQYSR PCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	6e-40	bHLH family protein