PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339200.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 342aa MW: 38116.4 Da PI: 8.2207

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.5	2.1e-12	166	211	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L l+P + kK++Ka++L +A++Y+k++q XP_027339200.1 166 HIIAERKRREKLSQRFIALSALVPGL-----KKMDKASVLGEAIRYLKQMQ 211 999*********************.....9***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MEISSIRGLS ELGIIEDPSF LHQWNLNPID TTSLTGAAFG EILQKHSVSD NPNFNSKTSM 60 ETSSGIERPT KQLKNNSWSH SKSQQSSETQ FASCSNLLSF VDSNYTSELG LVKPKVEMVC 120 PKINNNTLAD MLISQGTLGN QNYAFKACQE AKKIETRPKV SQPHDHIIAE RKRREKLSQR 180 FIALSALVPG LKKMDKASVL GEAIRYLKQM QEKVSALEEE QNRKKTVQSV VIVKKSQLSN 240 DSEDSSSSDT GGNTLNEALP EIEARFCERN VLIRVHCEKN KGVIEKTISE IEKLHLKVIN 300 SSALTFGSFA LDITIIAQMD MEFGMTVKDL VRSLRSAFSP FM

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MEISSIRGLS ELGIIEDPSF LHQWNLNPID TTSLTGAAFG EILQKHSVSD NPNFNSKTSM  60
ETSSGIERPT KQLKNNSWSH SKSQQSSETQ FASCSNLLSF VDSNYTSELG LVKPKVEMVC  120
PKINNNTLAD MLISQGTLGN QNYAFKACQE AKKIETRPKV SQPHDHIIAE RKRREKLSQR  180
FIALSALVPG LKKMDKASVL GEAIRYLKQM QEKVSALEEE QNRKKTVQSV VIVKKSQLSN  240
DSEDSSSSDT GGNTLNEALP EIEARFCERN VLIRVHCEKN KGVIEKTISE IEKLHLKVIN  300
SSALTFGSFA LDITIIAQMD MEFGMTVKDL VRSLRSAFSP FM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	175	ERKRRE
2	171	176	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	7e-57	bHLH family protein