PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027339183.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 27720.7 Da PI: 10.1194 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.8 | 3.7e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr+g+lKKA+E+SvLCdaeva+i+fs++gkl+e+ss XP_027339183.1 9 KRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSTKGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 105.6 | 6e-35 | 76 | 174 | 2 | 100 |
K-box 2 qkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 ++++ + +++ ++ +++ e+akLk+++e Lq++qR+++GedL+sLs+keLq+Le+qL+++lk+iRs+Kn+l++e+i++l kk k+lqe+n++L k XP_027339183.1 76 AERQLVTNNQPQNGNWTLEHAKLKARLEVLQKNQRNFMGEDLDSLSIKELQNLEHQLDSALKHIRSRKNQLMYESISQLHKKDKALQEQNNTLAK 170 66777788899999********************************************************************************* PP K-box 97 klee 100 k++e XP_027339183.1 171 KIKE 174 *987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVQLKR IENKINRQVT FSKRRTGLLK KANEISVLCD AEVALIVFST KGKLFEFSSD 60 PCMERILERY ERYSYAERQL VTNNQPQNGN WTLEHAKLKA RLEVLQKNQR NFMGEDLDSL 120 SIKELQNLEH QLDSALKHIR SRKNQLMYES ISQLHKKDKA LQEQNNTLAK KIKEKEKTLA 180 QQAQEQQNKN VDLTSAVLVP QPLETLNIGG SPETRGNGGN IDGTSTPAQV TLLPPWMLGP 240 TKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 1e-113 | MIKC_MADS family protein |