PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339036.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 211aa    MW: 23902.4 Da    PI: 10.2901
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339036.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.51.1e-25959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n   rqvtfskR+ g++KKA+ELS+LCdaevav +fs  gkl+ey+s
  XP_027339036.1  9 KKIDNIAARQVTFSKRKRGLFKKAQELSTLCDAEVAVTVFSAAGKLFEYAS 59
                    689**********************************************86 PP
2K-box45.43.3e-16851691296
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                      ++ + ++++  +++e+    re+R+l+Ge+L+ L+++eLq+Le+ L k+l+ + + K+e +++ + +l+kk  el ++n++L++
  XP_027339036.1  85 LQTDNDTNNYFVMRNEVADKTRELRKLKGEELQGLKIRELQKLEKLLRKGLTLVSKAKDERIVKDLTTLKKKGIELTQDNQRLKQ 169
                     457778888889999999999**************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MTKPKIEMKK IDNIAARQVT FSKRKRGLFK KAQELSTLCD AEVAVTVFSA AGKLFEYASS  60
SVQQVVERYN LHARIDKLQH PSVELQTDND TNNYFVMRNE VADKTRELRK LKGEELQGLK  120
IRELQKLEKL LRKGLTLVSK AKDERIVKDL TTLKKKGIEL TQDNQRLKQI QSLGNHQGQS  180
SKSIIVGSPS NHAKESDNDD ASLHLGLSLF E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.15e-53MIKC_MADS family protein