PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338995.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 215aa MW: 23824.8 Da PI: 8.6089

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338995.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.4	1.2e-43	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk++rrkC+++Cv+apyfp ++p++fa+vhk+FGasnv kll++l+ +reda++sl+yeAear+rdPvyG+vg+i+ lq++l+q+++el+ XP_027338995.1 11 PCAACKIQRRKCTQECVFAPYFPPDNPQRFAYVHKVFGASNVAKLLNELNAAQREDAVKSLAYEAEARLRDPVYGCVGLISILQHKLKQMQNELN 105 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_027338995.1 106 NAKKE 110 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MSSSSSSSNS PCAACKIQRR KCTQECVFAP YFPPDNPQRF AYVHKVFGAS NVAKLLNELN 60 AAQREDAVKS LAYEAEARLR DPVYGCVGLI SILQHKLKQM QNELNNAKKE LASYIGPHAV 120 IPPQPPRNAS TFSLFPFNAT PPPQDLFRFN DDGASASHGG FNHLSVFSPS HADHSFRQTQ 180 THPLPLPLHH HHHLMFSQMQ PKPESDQGRN TAPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	9e-65	LBD family protein