PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338851.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 181aa    MW: 20803.8 Da    PI: 9.6146
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.81.9e-30959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien+snrqvt+skR+ngilKKA+E+SvLCda+v++iif+ +gk++ey+s
  XP_027338851.1  9 KRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYIS 59
                    79***********************************************86 PP
2K-box88.71.1e-2971168198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yq++sgk l++ak+e+l++e+++Lkke++++q e+Rhl+Ged++sL++keL+ Le++L+++l+ +R+kK+e+ ++  ++ +  e++++e n  L+
  XP_027338851.1  71 YQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEEALDNGLNGVRDKKTEVHRMFKRNGKILEEQNKELNFLLQ 165
                     78999*****************************************************************************************9 PP

           K-box  96 kkl 98 
                     + l
  XP_027338851.1 166 QHL 168
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEISVLCD AQVSLIIFGA SGKMHEYISP  60
STTLIDVLDR YQRASGKTLW DAKHENLSNE IDRLKKENDS MQIELRHLKG EDITSLNYKE  120
LMALEEALDN GLNGVRDKKT EVHRMFKRNG KILEEQNKEL NFLLQQHLAL EGVGNMHGQW  180
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.13e-76MIKC_MADS family protein