PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338832.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 338aa MW: 38078.3 Da PI: 6.2532

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56	9.3e-18	25	72	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl XP_027338832.1 25 RGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 72 89********************************************97 PP
2	Myb_DNA-binding	48.4	2.1e-15	78	121	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_027338832.1 78 RGNITLEEQLLILELHGRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 121 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MEVKGRVISN SNTIIQSEDE MDLRRGPWTV DEDLALINYI ANHGEGRWNS LARSAGLKRT 60 GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL ELHGRWGNRW SKIAQYLPGR TDNEIKNYWR 120 TRVQKHAKQL KCDVNSKQFK DAMRYLWMPR LVERIQAAAA AAAAATAATT AGSPALSASA 180 AATVTTTNNT TYRYNYDNNL NNNFEVHSGN MMPSPAIMNN FGGSQITQSY TPENSSTGTV 240 ASSDSFGTHV SPVSDLTQDY YNVPVGNNNN NPNPDYYQQA HDQLSFLDCI TSPSGLFLQE 300 LDFQSMEPNT PWIQGEDTSN NFWNVENMLL FQQLSDSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	1e-85	MYB family protein