PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338387.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 388aa    MW: 43982.4 Da    PI: 4.9054
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338387.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF27.93e-09953145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    k+i+n + r+v f +R++ +l   +E ++ C+++ ++ii++ +g 
  XP_027338387.1  9 KFISNGREREVRFMNRKKRLLNNMSEFCTKCGVNGCLIIYGGDGD 53
                    79***************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MGRPKLTLKF ISNGREREVR FMNRKKRLLN NMSEFCTKCG VNGCLIIYGG DGDAQPVTWP  60
EDPIAVHSII EKYERTKNEK FPKNFDLKDF FKNRKNTIKI EISKVQKEIF NIKYPTWHAS  120
FDGLDEEKLW NFIALLDDKL EACNQRIIML RHNHQIEANF NFLQNMVQFT SAATSSSQLN  180
CMQTISLNQH IFAPMNPLND INLLASYQLN LDRGSSSQSQ MLNFDPSFMQ LMAKNNGVVD  240
DNCANQIGAL ENFTNQSNVV VDLSTSHLGD PLDCSNQLGE IEDWTNNYGK VFDWPTQFGE  300
TINWTNQHCV SMIGSTSYMN DASNFGTTIH ELENEGHEDN LESSLCNYCG NCGLENSTNQ  360
PNVPVDLMSQ LGGSMDCFTQ FSGFGKST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.18e-17M-type_MADS family protein