PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338353.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HSF
Protein Properties Length: 324aa    MW: 36816 Da    PI: 6.6355
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.82e-34471391102
                     HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXX CS
    HSF_DNA-bind   1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelle 95 
                     aFlkk+++++ed++++ ++sw e   sfvv+d+++f+k++LpkyFkh+nf+SF+RQLn+YgF+kv++++         weF+++ F+ gkk ll+
  XP_027338353.1  47 AFLKKTFDMVEDPNTDPIVSWGEGRYSFVVWDSQKFSKTLLPKYFKHTNFSSFIRQLNTYGFRKVDSKR---------WEFANEGFQGGKKYLLK 132
                     69****************************************************************998.........***************** PP

                     XXXXXXX CS
    HSF_DNA-bind  96 kikrkks 102
                     +i+r+++
  XP_027338353.1 133 HIRRRSK 139
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MVVPHGKAPP IMEEEGKAKA EEVDNAGCEN DDVLVESPKG IVVGPAAFLK KTFDMVEDPN  60
TDPIVSWGEG RYSFVVWDSQ KFSKTLLPKY FKHTNFSSFI RQLNTYGFRK VDSKRWEFAN  120
EGFQGGKKYL LKHIRRRSKC NKAFDSMKLG LEDEVEQLKK DQKMLKVEIL KLTQKHKDSQ  180
VQLASVEERV RCAELKQFQM LVFLTRMTKR PAFVEQLMHK VKQKGELDGA GMVKRPKLDT  240
TDVDYGHQGC EQLNTLQSEQ NGPLENVSCS SVHELRPIGY DVSYAYDVMS DKLMGESSGV  300
GEEVDVKGSN IYFELEDLIS KPAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.13e-67HSF family protein