PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338336.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 227aa MW: 23561.8 Da PI: 8.604

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338336.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	119.7	1.6e-37	20	120	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC++ Cv+apyf aeq + +fa+vhk+FGasnv kll+ +p ++r d++ +++yeA+ r++dP+yG+v+ i++lqqq+ +l+ae+ XP_027338336.1 20 PCGACKFLRRKCVATCVFAPYFDAEQgSTHFAAVHKVFGASNVAKLLAGTPVHRRLDTVITVCYEAQSRLKDPIYGCVSQIFALQQQVVNLQAEI 114 7*********************9988***************************************************************** PP DUF260 95 allkee 100 a+l+ + XP_027338336.1 115 AYLQGQ 120 *99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MNLNPNHNGG GGGGGGGGSP CGACKFLRRK CVATCVFAPY FDAEQGSTHF AAVHKVFGAS 60 NVAKLLAGTP VHRRLDTVIT VCYEAQSRLK DPIYGCVSQI FALQQQVVNL QAEIAYLQGQ 120 FAQLEIPHQP APPPPPHGVV APPAFAVADP PAAPAAAMPA AYDLPPAVDP MVHPNAWAMQ 180 QRAIDPRQYV ANAPSTSAPG GHQAMGRGVL RRHGSTSAHP ASSSNAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	1e-55	LBD family protein