PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338335.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family LBD
Protein Properties Length: 188aa    MW: 20630.3 Da    PI: 7.8653
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.62.4e-39101101100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC+k+C++apyf + q +++fa+vhk+FGasn +kll+++p+++r da+ +l+yeA ara dPvyG+vg+i++lqqq+ +l+ael
  XP_027338335.1  10 PCGACKFLRRKCVKGCIFAPYFDSGQgTAHFAAVHKVFGASNASKLLTRVPPHKRLDAVVTLCYEALARATDPVYGSVGHIFALQQQVVNLQAEL 104
                     7***********************9979******************************************************************* PP

          DUF260  95 allkee 100
                     a+++++
  XP_027338335.1 105 AYVHAR 110
                     **9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MDLGDGRNGP CGACKFLRRK CVKGCIFAPY FDSGQGTAHF AAVHKVFGAS NASKLLTRVP  60
PHKRLDAVVT LCYEALARAT DPVYGSVGHI FALQQQVVNL QAELAYVHAR LSTLHRVYVV  120
PPFPESCSST PNSNNELQSS YISMHFDNPT SLDLSSFLNP SYQQGDEQEL QALARDFVSR  180
FLPGINSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45410.12e-64LBD family protein