PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027338254.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 711aa    MW: 80274.4 Da    PI: 6.2356
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027338254.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.12.3e-162879556
                    SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                     ++++ q+  Le++ +++++p++++r++LA+++gL+ +q+k+WFqN+R++ k
  XP_027338254.1 28 KRLSSAQTAKLEKFIKECPHPDETQRRQLATEVGLEPKQIKFWFQNKRTQIK 79
                    67899*******************************************9988 PP
2START139.53.4e-442254481206
                     HHHHHHHHHHHHHHHHC-TT-EEEE.....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS
           START   1 elaeeaaqelvkkalaeepgWvkss.....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 
                     e+a +a++elv++   +ep+W kss       + ++ + ++f+++k       ++ea ++sg+v     +lve +ld+  +W + ++    kaet
  XP_027338254.1 225 EVATTAMEELVRLLRINEPFWIKSStqdgkLVLHRESYEKIFSRTKQfkganIHVEATKDSGMVNISGIQLVEMFLDSD-KWVNLFPtivtKAET 318
                     57899********************8876634556666666666555788999**************************.99999999999**** PP

                     EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE- CS
           START  82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwveh 169
                     ++v++sg      galqlm  e+  lsplv  R+f f+Ry++q ++g+wvi dvS d+ q+++   s  R+ ++pSg+li++++ng+s vtwveh
  XP_027338254.1 319 IKVLESGflgnrsGALQLMIEEMHILSPLVQaRKFQFLRYCQQIEDGQWVITDVSFDPFQQNN---SPSRSWRHPSGCLIQEMPNGYSMVTWVEH 410
                     ******************************99*****************************98...4669999********************** PP

                     EE--SSXX.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 170 vdlkgrlp.hwllrslvksglaegaktwvatlqrqcek 206
                     v++++++  h l+r +v+  +a ga +w+  lqr ce+
  XP_027338254.1 411 VEVDDKIQtHPLYRDIVSINMAYGAERWMMELQRMCER 448
                     ******999***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    
MDSSMGGVDG SGDEGTHTSH KGKRPSYKRL SSAQTAKLEK FIKECPHPDE TQRRQLATEV  60
GLEPKQIKFW FQNKRTQIKN QHERADNTAL RVENDRINSE NEFMKEALKN MLCPSCGGPP  120
YAEGEHEHFM QKMQLENAQL KDEHDKVSRL LARYLEKQMS QPELQQTVIP ITGSTSYDPP  180
HGSSLNHVID ESLCLDQSFS TQVIDDLLLS NSLGGVDVEK PFMLEVATTA MEELVRLLRI  240
NEPFWIKSST QDGKLVLHRE SYEKIFSRTK QFKGANIHVE ATKDSGMVNI SGIQLVEMFL  300
DSDKWVNLFP TIVTKAETIK VLESGFLGNR SGALQLMIEE MHILSPLVQA RKFQFLRYCQ  360
QIEDGQWVIT DVSFDPFQQN NSPSRSWRHP SGCLIQEMPN GYSMVTWVEH VEVDDKIQTH  420
PLYRDIVSIN MAYGAERWMM ELQRMCERFA WFYVEKIANH GFEGVINSLE GRRSVMNFSH  480
RMLKIFCQSL TMSGNLDFPH LTMENNSGVR VSIRKNTNLG QPNGMIVVAA TSLWLPLHYL  540
KIFEFFTDEK RRAQWDVLSC GNPVHKVAHI SHGTHPGNCT SIIRPFIPSE NNALILQESL  600
TNSMGSYVVY APTDVRTMNM AIQGEDSSLL PILPSGFVIV AHDDPNANLG AFDNTNVDRS  660
EGSLLTVAFQ ILACSPSGIN LLNMESVAAV NTLLTSTILK IKDALNCSNL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein