PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027338205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 171aa MW: 19430.2 Da PI: 5.9369 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 134.4 | 3.5e-42 | 5 | 93 | 12 | 100 |
NF-YC 12 katdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 + +df+ ++lPlarikki+kadedv mis ea v+++kace+fi+elt r+w++aeen+r tl+k+di a++rtd fdflvdivprd+ XP_027338205.1 5 EINDFRTRSLPLARIKKIMKADEDVDMISGEALVVVAKACEMFIMELTTRAWVKAEENRRLTLQKNDIRYAISRTDAFDFLVDIVPRDD 93 468************************************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 171 aa Download sequence |
MEKIEINDFR TRSLPLARIK KIMKADEDVD MISGEALVVV AKACEMFIME LTTRAWVKAE 60 ENRRLTLQKN DIRYAISRTD AFDFLVDIVP RDDTVEHEIV AGILRDTIPI NNVLYPMPPR 120 QHVAYAPHGP SRMAMGGPVL DQAHYGLDPH PSTTQMRPNP KQQDHSPNSD D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G48590.1 | 1e-46 | NF-YC family protein |