PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027338047.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WRKY

Protein Properties

Length: 356aa MW: 39865.5 Da PI: 6.9052

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027338047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.6	6.1e-29	127	188	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK++ gs++pr+YYrCt++ gC+++k+v+r++edp+v+ei Y+g+H+++ XP_027338047.1 127 LDDGYSWRKYGQKDILGSKYPRGYYRCTHRnvqGCMATKQVQRCDEDPTVFEICYRGNHTCT 188 59*************************98999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MGDWNYKNLI HELLQGMELT RQLQISLHMS SASLESRDLL IHKIIATFER AVKMLNKRTG 60 LVGEPSYLAT RVAIRMSESP PLSVSPSEDS NKDQRDLDQS FYKKRKTVPS WTKKIRVNPG 120 MGVEGPLDDG YSWRKYGQKD ILGSKYPRGY YRCTHRNVQG CMATKQVQRC DEDPTVFEIC 180 YRGNHTCTMS PYAVAPSGPQ ESQEPNMTTG PQHQSVDQQS SDLLLNLREG LRVLTENLDH 240 ASNKPFDSLF HHFPSTSNIK TEDQVFPSPA TENNFTYPSH VSPATSGTTY FSVSPSSGNS 300 FKGHPNLASS GFEINDMISA STSAANSPTV GLEFRFDQFN ILLDSQNFSF DNPPFS

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MGDWNYKNLI HELLQGMELT RQLQISLHMS SASLESRDLL IHKIIATFER AVKMLNKRTG  60
LVGEPSYLAT RVAIRMSESP PLSVSPSEDS NKDQRDLDQS FYKKRKTVPS WTKKIRVNPG  120
MGVEGPLDDG YSWRKYGQKD ILGSKYPRGY YRCTHRNVQG CMATKQVQRC DEDPTVFEIC  180
YRGNHTCTMS PYAVAPSGPQ ESQEPNMTTG PQHQSVDQQS SDLLLNLREG LRVLTENLDH  240
ASNKPFDSLF HHFPSTSNIK TEDQVFPSPA TENNFTYPSH VSPATSGTTY FSVSPSSGNS  300
FKGHPNLASS GFEINDMISA STSAANSPTV GLEFRFDQFN ILLDSQNFSF DNPPFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	1e-47	WRKY family protein