PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027337987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | WRKY | ||||||||
Protein Properties | Length: 580aa MW: 63091.9 Da PI: 6.7848 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.1 | 4.9e-30 | 246 | 304 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ XP_027337987.1 246 NDGCQWRKYGQKISKGNPCPRAYYRCTVApSCPVRKQVQRCAQDMSILITTYEGTHNHP 304 8***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MKFGSQKSAL EVEGVKHEKR SESSVGDEDD LREPKIVVQV PDMTTLEKSA VAARPKASPT 60 GKEEVDELEN AKAEMGEVIE ENQRLKMSLS RILNDYRTLQ MQFDYIVEQE TKDSSDKQKN 120 KHHEKIEESE LVSLSLGMLP SNQRNNEKAK VCEPLKEELE DKEGLALGLE CKFETSKSGS 180 TTENLPNSSP ANSGEVPKEE AAGESWPASK GHKTTRDAIE DEVSQQNSAK KARVCVRARC 240 DTPTLNDGCQ WRKYGQKISK GNPCPRAYYR CTVAPSCPVR KQVQRCAQDM SILITTYEGT 300 HNHPLPLSAT AMASTTSAAA SMLLSGSSTS HSGSIPSTSM TTTTANLHGM NFYLSDNSKS 360 KQFYLSHPTL SSSSPSHPTI TLDLTSNPPS SSTPFGRSLN YNSQRYPSST SLNFSSSESN 420 ATSWSLSYNN QPYNNRNILS NLNLARQPME NIYNSYMQRN NNPIPAQHSL PDTIAAATKV 480 ITSDPTFQSA LAAALTSIIG NGSTQGNHSV GEILSQKMKW GDQLFPSSAL PSSSKVNSCA 540 SGFLSKAPSN AQTGSLMFLQ PFSDPKSASG SPGDNRDDNN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15130.1 | 5e-67 | WRKY family protein |