PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337698.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 748aa MW: 82214.1 Da PI: 6.5176

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337698.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_027337698.1 24 RERWTEEEHNRFLEALKLHGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MDAYSSGEEV IVKTRKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFT KLEKEALVKG VPIGKALDID IPPPRPKRKP SNPYPRKTRV GTATLQSGAK 120 DAKLSSVESS HVNQALDLEK EPLPEKHNLD EVPTTVKENK DEKRSKVFTV LREVPCSSVS 180 SANKSSITMS VPLGNSRALK DITPSAKEAI ARNERNESFV TIELENRKLE TDNGKQTNGT 240 SEDSTLDNSD ALQVKLVQNE NTDGLDCALT IDGMQGNQNY PRHVTVHVID GNLGTRTQNP 300 QDMLFRDSMF QPIGGVNGQP NLFTNSAASN TSESQNNTAR SSVHQSFLPY PPFPQHNQDD 360 YQSFLHMSST FSSLIVSTLL QNPAAHAAAS FAATFWPYAN PETPADSPRC SQGGFPPRQI 420 GSPPSVAAIA AATVAAATAW WAAHGLLPLC ALHTAFACPP ASVTAVPSMN NTGSEAPASK 480 TDQGKTTLQN PPQQDQMMFP EYSEAQQAQH SASKSPAVIS SDSESGDAKL NTSKATDHEM 540 NKTISEHLDS NKMKGRQQVD RSSCGSNTTS SSDVETDALE KDEKRKEEPE TPDANHLAIE 600 SCNRRSRSVS NLTDSWKEVS EEGRLAFQAL FSREVLPQSF SPPHDLKNAD HQVENIKDNK 660 QNIDEDLDSK KCSSNYEEVQ KNSPFVENNE EGLLTIGLGQ GKLKTRRTGF KPYKRCSVEA 720 NENRVGTTGN QGEEKGCKRI RLEGEASI

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MDAYSSGEEV IVKTRKPYTI TKQRERWTEE EHNRFLEALK LHGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFT KLEKEALVKG VPIGKALDID IPPPRPKRKP SNPYPRKTRV GTATLQSGAK  120
DAKLSSVESS HVNQALDLEK EPLPEKHNLD EVPTTVKENK DEKRSKVFTV LREVPCSSVS  180
SANKSSITMS VPLGNSRALK DITPSAKEAI ARNERNESFV TIELENRKLE TDNGKQTNGT  240
SEDSTLDNSD ALQVKLVQNE NTDGLDCALT IDGMQGNQNY PRHVTVHVID GNLGTRTQNP  300
QDMLFRDSMF QPIGGVNGQP NLFTNSAASN TSESQNNTAR SSVHQSFLPY PPFPQHNQDD  360
YQSFLHMSST FSSLIVSTLL QNPAAHAAAS FAATFWPYAN PETPADSPRC SQGGFPPRQI  420
GSPPSVAAIA AATVAAATAW WAAHGLLPLC ALHTAFACPP ASVTAVPSMN NTGSEAPASK  480
TDQGKTTLQN PPQQDQMMFP EYSEAQQAQH SASKSPAVIS SDSESGDAKL NTSKATDHEM  540
NKTISEHLDS NKMKGRQQVD RSSCGSNTTS SSDVETDALE KDEKRKEEPE TPDANHLAIE  600
SCNRRSRSVS NLTDSWKEVS EEGRLAFQAL FSREVLPQSF SPPHDLKNAD HQVENIKDNK  660
QNIDEDLDSK KCSSNYEEVQ KNSPFVENNE EGLLTIGLGQ GKLKTRRTGF KPYKRCSVEA  720
NENRVGTTGN QGEEKGCKRI RLEGEASI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.3	1e-131	MYB_related family protein