PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337582.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 150aa    MW: 16977.3 Da    PI: 9.0126
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337582.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC53.74.7e-1712941697
           NF-YC 16 fknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivp 97
                      + e+P +r+kki+  de+vk++s+ea  l+s++ elf+  l+  s   a e+kr+t+k   i  av+r   + dfl+d  p
  XP_027337582.1 12 SSEPEFPKSRVKKIMTLDEEVKRVSSEALFLVSRSTELFLQYLAENSAQVAIEKKRKTVKLEHIRMAVKRHRpTRDFLLDSLP 94
                    34779***************************************************************9975389*****987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MVMAEEEEKA VSSEPEFPKS RVKKIMTLDE EVKRVSSEAL FLVSRSTELF LQYLAENSAQ  60
VAIEKKRKTV KLEHIRMAVK RHRPTRDFLL DSLPLPSQPT KPDGPTPAGD RPKSNTAPPG  120
TRRIDHFFRK PESENQTQAP IDAQAPIDES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43250.12e-41NF-YC family protein