PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337509.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 469aa MW: 54404.2 Da PI: 5.7429

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337509.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.6	1.2e-17	182	228	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd ll+++v+q+G + W+ Ia+ ++ gR +kqc++rw+++l XP_027337509.1 182 KGQWTVEEDGLLIQLVEQHGLRKWSHIAKVLP-GRVGKQCRERWHNHL 228 799***************************.***********97 PP
2	Myb_DNA-binding	59.4	8e-19	234	276	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT eEd++l++a+ +lG++ W+ Ia++++ gRt++++k++w+ XP_027337509.1 234 KDNWTDEEDKILIQAHGELGNK-WAEIAKRLP-GRTENSIKNHWN 276 689*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MDPETRFKEI SLQPMHLQES FLQSSMKYNI SYGNPSQEFL EDFHYSDQFH VDDSSTNPIQ 60 FQTPNFDGFD NFTFNCSSSD FDVYECKPFA ENTSNGHPHV WNNFLYSLSL PQRNQLDMMV 120 ANQNFFPFNP QETNPMNFVA PDEVSCIFPV NYYKEVGVNK NNRSYPTTRR TYKVPKKSNM 180 VKGQWTVEED GLLIQLVEQH GLRKWSHIAK VLPGRVGKQC RERWHNHLRP DIKKDNWTDE 240 EDKILIQAHG ELGNKWAEIA KRLPGRTENS IKNHWNATKR RQYSKRKCRL KHPRGTLLQD 300 YIKSLNLDKN PPIDYRRKSS SNYASAMKNK TSTSKVTIPT LPLTADQFCA NDCLVPNYDF 360 NGVPDFLFAE NLFEEGCSID SLLDGMPCAP TLDKQDFEEK MQCDPIKEGK YFDQGGIKCA 420 HVVNISENHA ETEMPLEIME PILEVEIKEE LDLVEMMSQV NNEIVHETL

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MDPETRFKEI SLQPMHLQES FLQSSMKYNI SYGNPSQEFL EDFHYSDQFH VDDSSTNPIQ  60
FQTPNFDGFD NFTFNCSSSD FDVYECKPFA ENTSNGHPHV WNNFLYSLSL PQRNQLDMMV  120
ANQNFFPFNP QETNPMNFVA PDEVSCIFPV NYYKEVGVNK NNRSYPTTRR TYKVPKKSNM  180
VKGQWTVEED GLLIQLVEQH GLRKWSHIAK VLPGRVGKQC RERWHNHLRP DIKKDNWTDE  240
EDKILIQAHG ELGNKWAEIA KRLPGRTENS IKNHWNATKR RQYSKRKCRL KHPRGTLLQD  300
YIKSLNLDKN PPIDYRRKSS SNYASAMKNK TSTSKVTIPT LPLTADQFCA NDCLVPNYDF  360
NGVPDFLFAE NLFEEGCSID SLLDGMPCAP TLDKQDFEEK MQCDPIKEGK YFDQGGIKCA  420
HVVNISENHA ETEMPLEIME PILEVEIKEE LDLVEMMSQV NNEIVHETL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-94	MYB family protein