PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337468.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 459aa MW: 51276.7 Da PI: 8.4869

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.3	2.3e-15	143	189	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W eEd +l++++kq+G + W+ Ia+++ gR +kqc++rw+++l XP_027337468.1 143 KGQWAVEEDRKLLKLIKQHGVRKWSQIAEKLE-GRAGKQCRERWHNHL 189 799***************************.***********97 PP
2	Myb_DNA-binding	51	3.3e-16	195	237	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++W++eE+ +lv+ + + G++ W+ Ia++++ gRt++ +k++w+ XP_027337468.1 195 KDSWSEEEERILVETHSKIGNR-WAEIAKRIP-GRTENAIKNHWN 237 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MKGIGGKGVG GNAITHLHVC GNIKVTNPSM CRSGPPLTAI DRFLWGQQSH SPQKQKPQNI 60 ASNGHASVFD GFACSGGSTN KCLWPNISQE ANFIDQILAN EVALNWTQHI PTLCVKEDVQ 120 VLGKNAKVAA RRPKKGSSVP LIKGQWAVEE DRKLLKLIKQ HGVRKWSQIA EKLEGRAGKQ 180 CRERWHNHLR PDIKKDSWSE EEERILVETH SKIGNRWAEI AKRIPGRTEN AIKNHWNATK 240 RRQNSKRKNK RPATSNGKPQ SSILQDYIKS LTLTNTTPTT PFEDPIAAQQ HLVSPQLSDS 300 VTNDNSSSPL IAESYDDELL FMQQLFKDNF IVESINIKHS KNNNSSTSLA CYNQSNGDQL 360 LTDVNECGFI HSNPNTNSHN MFFDENLIIP RKTHPTPTNY LDSDAYLSHL LNGTAASSLC 420 YNYGIENHNM DLDVGEQGCL EGKREIDLIE LVCSAQLLH

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MKGIGGKGVG GNAITHLHVC GNIKVTNPSM CRSGPPLTAI DRFLWGQQSH SPQKQKPQNI  60
ASNGHASVFD GFACSGGSTN KCLWPNISQE ANFIDQILAN EVALNWTQHI PTLCVKEDVQ  120
VLGKNAKVAA RRPKKGSSVP LIKGQWAVEE DRKLLKLIKQ HGVRKWSQIA EKLEGRAGKQ  180
CRERWHNHLR PDIKKDSWSE EEERILVETH SKIGNRWAEI AKRIPGRTEN AIKNHWNATK  240
RRQNSKRKNK RPATSNGKPQ SSILQDYIKS LTLTNTTPTT PFEDPIAAQQ HLVSPQLSDS  300
VTNDNSSSPL IAESYDDELL FMQQLFKDNF IVESINIKHS KNNNSSTSLA CYNQSNGDQL  360
LTDVNECGFI HSNPNTNSHN MFFDENLIIP RKTHPTPTNY LDSDAYLSHL LNGTAASSLC  420
YNYGIENHNM DLDVGEQGCL EGKREIDLIE LVCSAQLLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	251	KRRQNSKRKNKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58850.1	1e-75	MYB family protein