PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027337334.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 562aa    MW: 62538.7 Da    PI: 6.382
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027337334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS253.58e-781685482374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     ++lL  cA a++ g+l+++q+lL  l+elasp+gd+++Rla + ++AL ++l++s+s+ +++  + + ++++     ++l  f+evsP++ f + 
  XP_027337334.1 168 EQLLNPCAVAITGGNLNRVQHLLYVLHELASPTGDANHRLAEHGLRALTHHLSSSTSSKSSSSGALTFASTEPRFFQKSLLKFYEVSPWFSFPNN 262
                     689***************************************************9999888888888887777777777777************* PP

            GRAS  97 taNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg..........skeeleetgerLakfAeelgvpf 176
                     +aN  Il+ + +e    +++Hi+D+++s+G+QWp++l+aL+ Rp ++pp +R+T+v +++++                +  +rL  fA++++v++
  XP_027337334.1 263 IANASILQVLGEEanssRTLHILDIGVSHGVQWPTFLEALSRRPgGPPPLVRLTVVTASSTEndpnmetpfsVGPPGDNFSSRLLGFAQSMNVNL 357
                     *******9998887777899************************55566*******9988778888887776667788999************** PP

            GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh...nsesFlerflealeyysalf 268
                     +++ l  + l++l+ + +++ p+E  +V+ +++lh+l ++s +   er e+Lk++k+++Pk v+++++++d+   + ++F+++f++ +ey + ++
  XP_027337334.1 358 QIKRLDNHPLQTLNAQIIDTYPDEIFVVCAQFRLHHLNHNSPD---ERIEFLKMLKNMEPKGVILSDNNMDCccsSCGNFATGFSKRVEYLWRFL 449
                     ****9999*****************************955555...555********************9986334459**************** PP

            GRAS 269 dsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgW 362
                     ds+++ +    + r + Er++++ e+ ++++ + ++    +e +ekW er++eaGF    ++e++++ a++llrk++ s++++ve+++ s+ l W
  XP_027337334.1 450 DSTSSAF----KGRENDERRVMEGEAAKALTYQREM----NEGKEKWCERMKEAGFVGEVFGEDVTDGARALLRKYDsSWEMKVEDNNTSVGLWW 536
                     ***6665....5555556666666688888877766....99***********************************9999************** PP

            GRAS 363 kdrpLvsvSaWr 374
                     k++p+ ++S W+
  XP_027337334.1 537 KGQPVSFCSLWK 548
                     ***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 562 aa     Download sequence    
MTMEPNPSSD HILDWFEGSV PFFPPFLDDP YNTSDIQVYQ LWDQDQDISN HYQIDTNIGS  60
PNATNITTAA STTTSITPLE PYDSNNHQPL SDLPKKRNAT DESSLKPSQN HRHKKIKSHP  120
MNEANNGDAA VQGASTTVKK SGGNKKGAAK ANGNNSNNGN NKEGRWAEQL LNPCAVAITG  180
GNLNRVQHLL YVLHELASPT GDANHRLAEH GLRALTHHLS SSTSSKSSSS GALTFASTEP  240
RFFQKSLLKF YEVSPWFSFP NNIANASILQ VLGEEANSSR TLHILDIGVS HGVQWPTFLE  300
ALSRRPGGPP PLVRLTVVTA SSTENDPNME TPFSVGPPGD NFSSRLLGFA QSMNVNLQIK  360
RLDNHPLQTL NAQIIDTYPD EIFVVCAQFR LHHLNHNSPD ERIEFLKMLK NMEPKGVILS  420
DNNMDCCCSS CGNFATGFSK RVEYLWRFLD STSSAFKGRE NDERRVMEGE AAKALTYQRE  480
MNEGKEKWCE RMKEAGFVGE VFGEDVTDGA RALLRKYDSS WEMKVEDNNT SVGLWWKGQP  540
VSFCSLWKLD ENEHGRPLTA RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-150GRAS family protein