PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337316.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 298aa MW: 33694.1 Da PI: 5.4623

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337316.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.8	1.2e-40	17	116	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkCa+dC+lapyfp++++ +f n+hklFG+sn++k++k l+++++++am++++y++++ra+dPv G+++ i++lq q+e +ael+ XP_027337316.1 17 ACAACKHQRRKCAPDCILAPYFPHDRQPQFLNAHKLFGVSNIVKIIKFLDPHDKDQAMRTIIYQSDMRANDPVGGCYRYIQDLQAQIEYYRAELE 111 7*********************************************************************************************9 PP DUF260 96 llkee 100 l+ ++ XP_027337316.1 112 LVLQQ 116 98776 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MNNNNNTTRN GNSTTQACAA CKHQRRKCAP DCILAPYFPH DRQPQFLNAH KLFGVSNIVK 60 IIKFLDPHDK DQAMRTIIYQ SDMRANDPVG GCYRYIQDLQ AQIEYYRAEL ELVLQQLAIF 120 RAQAHHQQQH GMYAPTTNNV NVSVNGDGEV INGDPLSLYN QPPVVSSKPH YQYLPQQEQY 180 VMMHEIDNSS QNSNANLLQE HINTWAMQNS MSLSSLSLQG QSSNVSDEYD HKPVLDLHSD 240 ERSELGFDSE ELVHRSDEAV LFKIDDAVIK AEADCIQQAQ DHDLKGAATL FTLTNXTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	4e-56	LBD family protein