PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027337310.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 504aa MW: 55545.1 Da PI: 6.9051

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027337310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24	6.8e-08	418	458	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_027337310.1 418 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 458 69****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MGKARLGNSR IKPPFLLKLL DLQVELVARI TFYSKFHQNL QSSMDGLSWD ASELATNTPI 60 LWSTLQQQDF EGGYSMPNIS SSVLNQLQEM QKAPTCHAYA NSERVIYQSV DATTSEMIDV 120 MPNTNMSQHA STMEGKSGAG ASWREALTSQ SCPSLSVNGP HNMNLISNYM PDFNMAHHHH 180 HHHQQQQQQQ QLINGSKNGK GAFSPESFDC LLSDTNSNTD TSVKDDGISM ILSDCGNLWN 240 FSYGSAATST GESESNASNG KNKDMQCPVN ELDETVSQSS SDQHVNQGKE IESKVICSKR 300 NNDQAEMIKV GATASDSCFS IANNSSIEGG FKLISNNPPK CKKPRWDRSS CSSNINFQQP 360 NSSVSCSIEE PDPEAIAQMK EMIYRAAAFR PVNLGLEVVE KPKRKNVRIS TDPQTVAARQ 420 RRERISERIR VLQKLVPGGS KMDTASMLDE AANYLKFLRS QVKALESLGN KVDALNCPPT 480 SIAFSFNPSF PMQTPLSHIH HSQG

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MGKARLGNSR IKPPFLLKLL DLQVELVARI TFYSKFHQNL QSSMDGLSWD ASELATNTPI  60
LWSTLQQQDF EGGYSMPNIS SSVLNQLQEM QKAPTCHAYA NSERVIYQSV DATTSEMIDV  120
MPNTNMSQHA STMEGKSGAG ASWREALTSQ SCPSLSVNGP HNMNLISNYM PDFNMAHHHH  180
HHHQQQQQQQ QLINGSKNGK GAFSPESFDC LLSDTNSNTD TSVKDDGISM ILSDCGNLWN  240
FSYGSAATST GESESNASNG KNKDMQCPVN ELDETVSQSS SDQHVNQGKE IESKVICSKR  300
NNDQAEMIKV GATASDSCFS IANNSSIEGG FKLISNNPPK CKKPRWDRSS CSSNINFQQP  360
NSSVSCSIEE PDPEAIAQMK EMIYRAAAFR PVNLGLEVVE KPKRKNVRIS TDPQTVAARQ  420
RRERISERIR VLQKLVPGGS KMDTASMLDE AANYLKFLRS QVKALESLGN KVDALNCPPT  480
SIAFSFNPSF PMQTPLSHIH HSQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	419	424	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	3e-70	bHLH family protein