PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336979.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Nin-like

Protein Properties

Length: 405aa MW: 45543.4 Da PI: 5.1258

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336979.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	65.9	6.4e-21	306	355	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++l+d s yF+lpi++A++++ +c+Tv+K+iCR+ +kRWP+Rk+ks+ XP_027336979.1 306 RRMKLSDFSDYFHLPIEEASRQVSLCPTVVKKICRRAKLKRWPYRKVKSI 355 67999*******************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MPFTGSQITN ESWRPCLFGA ATPITRTPIS IFIAQRGTSF VCVVMENAGF VPSHDTNTFD 60 WSNATLAHFT NDAPNALSQQ LNTSFGLEPL IDPIIQQGHL PFADPIIQQG SLPFADPMVQ 120 DHFMHNNGGT GNFPEGPSLP DPENENLEFN EVLPLSHWPQ SPAPFFCSCC HVLREIIHTN 180 GTNFQKLEIH GTLGLITHAI HRQNITGADP NSVQYEMIDF CYRNSDEIKT FLVNYCAQQA 240 SSGYIIVQDP LSTYYETLCT GLDWTEDLSD ECIDLNPNNS ANEMEQEAEN GTGTKISLAS 300 QRERARRMKL SDFSDYFHLP IEEASRQVSL CPTVVKKICR RAKLKRWPYR KVKSITKEIE 360 LLRRALESED AMSRARTQED INRLVQQMIR HCGGVLPTAI DINPL

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MPFTGSQITN ESWRPCLFGA ATPITRTPIS IFIAQRGTSF VCVVMENAGF VPSHDTNTFD  60
WSNATLAHFT NDAPNALSQQ LNTSFGLEPL IDPIIQQGHL PFADPIIQQG SLPFADPMVQ  120
DHFMHNNGGT GNFPEGPSLP DPENENLEFN EVLPLSHWPQ SPAPFFCSCC HVLREIIHTN  180
GTNFQKLEIH GTLGLITHAI HRQNITGADP NSVQYEMIDF CYRNSDEIKT FLVNYCAQQA  240
SSGYIIVQDP LSTYYETLCT GLDWTEDLSD ECIDLNPNNS ANEMEQEAEN GTGTKISLAS  300
QRERARRMKL SDFSDYFHLP IEEASRQVSL CPTVVKKICR RAKLKRWPYR KVKSITKEIE  360
LLRRALESED AMSRARTQED INRLVQQMIR HCGGVLPTAI DINPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	9e-11	Nin-like family protein