PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336771.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 170aa MW: 19129.7 Da PI: 6.7437

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.6	2.4e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +Ca+Ck+lrr+C+k+C++apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+sslvyeA+ar+rdPvyG+vg i+ lq+q++ql+ +la XP_027336771.1 6 PCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIQQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSQLQMQLA 100 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027336771.1 101 VAQAE 105 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MGGTSPCASC KLLRRRCTKE CIFAPYFPSD DPRKFAIVHK VFGASNVSKM LQELPIQQRA 60 DAVSSLVYEA NARVRDPVYG CVGAISYLQS QVSQLQMQLA VAQAEIFCMQ MQQQEPTLAT 120 QIDQDHKSLL LSENNNYEIL PYYLNFPSSS SSSSNVFHDS ESLKRESFWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	5e-64	LBD family protein