PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027336675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
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Family | HB-PHD | ||||||||
Protein Properties | Length: 717aa MW: 82121.8 Da PI: 9.6181 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30 | 9.2e-10 | 501 | 543 | 11 | 53 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 +e L ++F++n p ++ +e L+k+lgL+ ++V+ WF+N R+ XP_027336675.1 501 AVEKLRQVFAENELPPRSVKEGLSKELGLDPEKVSKWFKNARY 543 5789*************************************97 PP | |||||||
2 | PHD | 39.7 | 1.1e-13 | 235 | 290 | 1 | 51 |
SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ C+ + +++++lCd +C+++fH+ Cl+++l++e++p g w+C+ C++k XP_027336675.1 235 FCANCKLheAFPDNDIILCDgTCNRAFHQRCLNPPLDTENIPPGdqGWFCKFCECK 290 699999954445********56********************9999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 717 aa Download sequence |
MKDTENLNNK RSRKSSQSKE QTKSKLVSSK FKTRSTKCRG KKHKVKSKSH KLRVGTNTSR 60 RTVSDSSIKA PIEDSSNKNV IIRKNLHKTD GKSSQMLSSA KLQGEKVSHS SRKHGIDVDE 120 KAKIKKRKRR RKKKRRRDKV DLDDASRLLR RTRYLLIKMK LEQNLIDAYS GEGWKGQSRE 180 KIRPEKELLR AKKQILKCKL SIRDAIHQLD SLSSVGSIED SVIAPDGSVY HEHIFCANCK 240 LHEAFPDNDI ILCDGTCNRA FHQRCLNPPL DTENIPPGDQ GWFCKFCECK IEILEATNAH 300 LGTQFSLDST WQDVFKEEAS MPDGDIALLN PVEEWPSDDP EDDDYNPERK EDSHSINMEG 360 DDENASDDLS SSSSPWSLNG ESSPVDDSVN HEYYSVNSCL YSDKLGEIAF GRRQRRAVDY 420 KKLYDEMFGK DALPSEQVSE DEDWGPGKRK QREKESDAVN TLITLHESEN KYPNNENNDK 480 IIDGSSGIQV RRPCFRIPLD AVEKLRQVFA ENELPPRSVK EGLSKELGLD PEKVSKWFKN 540 ARYLALKTRR FQAEGEQLQS FTSKISKDSV SQNMEKDELL KSKASKITVT HSQKNGENVT 600 CKEKIKLSSP LKKRQPKLYP PVTRQNGNKD TVEISDDISL KKLLKKRKKR VNFTFEGDSQ 660 AAELEFERLS KVKIKLDSMK QKLNELQNFR AKDSHKLYLN EPCVIYVPTA ELREKVE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 10 | 44 | KRSRKSSQSKEQTKSKLVSSKFKTRSTKCRGKKHK |
2 | 121 | 133 | KAKIKKRKRRRKK |
3 | 125 | 130 | KKRKRR |
4 | 125 | 131 | KKRKRRR |
5 | 125 | 133 | KKRKRRRKK |
6 | 126 | 132 | KKRKRRR |
7 | 126 | 134 | KKRKRRRKK |
8 | 126 | 131 | KRKRRR |
9 | 127 | 133 | KKRKRRR |
10 | 127 | 135 | KKRKRRRKK |
11 | 127 | 131 | RKRRR |
12 | 127 | 134 | RKRRRKKK |
13 | 127 | 138 | RKRRRKKKRRRD |
14 | 127 | 139 | RKRRRKKKRRRDK |
15 | 128 | 134 | KKRKRRR |
16 | 128 | 136 | KKRKRRRKK |
17 | 129 | 135 | KKRKRRR |
18 | 129 | 137 | KKRKRRRKK |
19 | 129 | 140 | RKRRRKKKRRRD |
20 | 129 | 141 | RKRRRKKKRRRDK |
21 | 129 | 135 | RRRKKKR |
22 | 130 | 136 | KKRKRRR |
23 | 130 | 141 | RKRRRKKKRRRD |
24 | 130 | 142 | RKRRRKKKRRRDK |
25 | 130 | 135 | RRKKKR |
26 | 130 | 160 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
27 | 130 | 136 | RRRKKKR |
28 | 131 | 137 | KKRKRRR |
29 | 131 | 142 | RKRRRKKKRRRD |
30 | 131 | 143 | RKRRRKKKRRRDK |
31 | 131 | 161 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
32 | 132 | 137 | KKKRRR |
33 | 132 | 137 | KRKRRR |
34 | 132 | 162 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
35 | 133 | 163 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
36 | 134 | 164 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
37 | 640 | 648 | LKKLLKKRK |
38 | 642 | 648 | KLLKKRK |
39 | 645 | 649 | KKRKK |
40 | 645 | 675 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
41 | 646 | 676 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
42 | 647 | 677 | RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29940.1 | 1e-153 | HB-PHD family protein |