PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336666.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HB-PHD
Protein Properties Length: 717aa    MW: 82121.8 Da    PI: 9.6181
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336666.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox309.2e-105015431153
                     HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox  11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      +e L ++F++n  p ++ +e L+k+lgL+ ++V+ WF+N R+
  XP_027336666.1 501 AVEKLRQVFAENELPPRSVKEGLSKELGLDPEKVSKWFKNARY 543
                     5789*************************************97 PP
2PHD39.71.1e-13235290151
                     SBTTTSS..TCTTSSEEEBS.SSSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCd.gCkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ C+   +  +++++lCd +C+++fH+ Cl+++l++e++p g   w+C+ C++k
  XP_027336666.1 235 FCANCKLheAFPDNDIILCDgTCNRAFHQRCLNPPLDTENIPPGdqGWFCKFCECK 290
                     699999954445********56********************9999*******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MKDTENLNNK RSRKSSQSKE QTKSKLVSSK FKTRSTKCRG KKHKVKSKSH KLRVGTNTSR  60
RTVSDSSIKA PIEDSSNKNV IIRKNLHKTD GKSSQMLSSA KLQGEKVSHS SRKHGIDVDE  120
KAKIKKRKRR RKKKRRRDKV DLDDASRLLR RTRYLLIKMK LEQNLIDAYS GEGWKGQSRE  180
KIRPEKELLR AKKQILKCKL SIRDAIHQLD SLSSVGSIED SVIAPDGSVY HEHIFCANCK  240
LHEAFPDNDI ILCDGTCNRA FHQRCLNPPL DTENIPPGDQ GWFCKFCECK IEILEATNAH  300
LGTQFSLDST WQDVFKEEAS MPDGDIALLN PVEEWPSDDP EDDDYNPERK EDSHSINMEG  360
DDENASDDLS SSSSPWSLNG ESSPVDDSVN HEYYSVNSCL YSDKLGEIAF GRRQRRAVDY  420
KKLYDEMFGK DALPSEQVSE DEDWGPGKRK QREKESDAVN TLITLHESEN KYPNNENNDK  480
IIDGSSGIQV RRPCFRIPLD AVEKLRQVFA ENELPPRSVK EGLSKELGLD PEKVSKWFKN  540
ARYLALKTRR FQAEGEQLQS FTSKISKDSV SQNMEKDELL KSKASKITVT HSQKNGENVT  600
CKEKIKLSSP LKKRQPKLYP PVTRQNGNKD TVEISDDISL KKLLKKRKKR VNFTFEGDSQ  660
AAELEFERLS KVKIKLDSMK QKLNELQNFR AKDSHKLYLN EPCVIYVPTA ELREKVE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11044KRSRKSSQSKEQTKSKLVSSKFKTRSTKCRGKKHK
2121133KAKIKKRKRRRKK
3125130KKRKRR
4125131KKRKRRR
5125133KKRKRRRKK
6126132KKRKRRR
7126134KKRKRRRKK
8126131KRKRRR
9127133KKRKRRR
10127135KKRKRRRKK
11127131RKRRR
12127134RKRRRKKK
13127138RKRRRKKKRRRD
14127139RKRRRKKKRRRDK
15128134KKRKRRR
16128136KKRKRRRKK
17129135KKRKRRR
18129137KKRKRRRKK
19129140RKRRRKKKRRRD
20129141RKRRRKKKRRRDK
21129135RRRKKKR
22130136KKRKRRR
23130141RKRRRKKKRRRD
24130142RKRRRKKKRRRDK
25130135RRKKKR
26130160RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
27130136RRRKKKR
28131137KKRKRRR
29131142RKRRRKKKRRRD
30131143RKRRRKKKRRRDK
31131161RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
32132137KKKRRR
33132137KRKRRR
34132162RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
35133163RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
36134164RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
37640648LKKLLKKRK
38642648KLLKKRK
39645649KKRKK
40645675RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
41646676RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
42647677RRKKKRRRDKVDLDDASRLLRRTRYLLIKMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.11e-153HB-PHD family protein