PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336464.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 659aa    MW: 73699.7 Da    PI: 6.0326
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.13.1e-963036583374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++L++ Ae +++g+   aq +Larl+++ sp g+p+qR+a+y++eAL + l++   ++ + l+ s+ s    + ++ a+k fse+sP+l+f+++t
  XP_027336464.1 303 DQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHS---NVQNLLAFSPIS---FIFKIGAYKSFSEISPVLQFANFT 391
                     689*************************************************9...666666777776...99********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     +Nqa+ eave+ +r+HiiDfdi+ G+QW +++q+La R++g+psl++T+v+sp++ ++ el+ t+e+L++ A+ ++++fe nvl  +++++ +  
  XP_027336464.1 392 CNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGAPSLKVTAVVSPSTCDEVELNFTRENLNQHAKDINMSFELNVLSIESFNSPSCP 486
                     ************************************************************************************9999**99999 PP

            GRAS 193 eL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                      L ++  +Ea+aVn+ ++ ++ +      +s  ++vL++vk+l+Pkvvv  ++++d+ + s+   +++ l++ysal++sl+a    + +  +k+E
  XP_027336464.1 487 LLgQFFDNEAIAVNMPVSCFTNY------PSLFPSVLHFVKQLRPKVVVTLDRNCDRIDVSLPINVVHVLQCYSALLESLDAV-NVNLDVLQKIE 574
                     9966778**********999888......555568*********************************************665.3466999**** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     r++++++i++++   + +    +e+l  Wr+ + ++GF+p ++++ +++qa++l+++ +++g++ve +  sl+l+W++++L+svS Wr
  XP_027336464.1 575 RHFIQPAIKKIILGHQHS----QEKLPPWRNLFLQSGFSPFTFTNVTEAQAECLVQRAPVRGFHVERKPSSLILCWQRKELISVSTWR 658
                     *************99988....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 659 aa     Download sequence    
MKAMPLPFEE FQGKGVLDFA SASDSFSLLL HHPQKWTIDK EDYCYVGTEC TSLLDSRRSP  60
SSLTCSSTMS SSLGSNNSNS KGGSGSANNT TVSAPTVSEN PPQESLETSP EKCGMRMEDW  120
EGQDQSILRL IMGDVEDPSA GLNKLLQSSG CASQSVDFNA GFGVVDQGLN NMQQEFGVVD  180
EKPQVINPQF MLNQNQVQFS ENPSFFVPLM YPPVQEQQVF SQHQAKRPLF DPVGHNYQVP  240
RLPLLDSGQE LFGRRQQTQL PLFPHHIQPS QQQQTLVMPS AKPQKVSSTG EDSNHQLQQA  300
IFDQLYKTAE LIEAGNPVHA QGILARLNHQ LSPIGKPFQR AAFYMKEALM SLLHSNVQNL  360
LAFSPISFIF KIGAYKSFSE ISPVLQFANF TCNQALIEAV ERFDRIHIID FDIGFGVQWS  420
SFMQELALRN SGAPSLKVTA VVSPSTCDEV ELNFTRENLN QHAKDINMSF ELNVLSIESF  480
NSPSCPLLGQ FFDNEAIAVN MPVSCFTNYP SLFPSVLHFV KQLRPKVVVT LDRNCDRIDV  540
SLPINVVHVL QCYSALLESL DAVNVNLDVL QKIERHFIQP AIKKIILGHQ HSQEKLPPWR  600
NLFLQSGFSP FTFTNVTEAQ AECLVQRAPV RGFHVERKPS SLILCWQRKE LISVSTWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-115GRAS family protein