PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336463.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 717aa    MW: 79636.1 Da    PI: 5.5707
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336463.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS313.83.9e-963617163374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++L++ Ae +++g+   aq +Larl+++ sp g+p+qR+a+y++eAL + l++   ++ + l+ s+ s    + ++ a+k fse+sP+l+f+++t
  XP_027336463.1 361 DQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHS---NVQNLLAFSPIS---FIFKIGAYKSFSEISPVLQFANFT 449
                     689*************************************************9...666666777776...99********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                     +Nqa+ eave+ +r+HiiDfdi+ G+QW +++q+La R++g+psl++T+v+sp++ ++ el+ t+e+L++ A+ ++++fe nvl  +++++ +  
  XP_027336463.1 450 CNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELALRNSGAPSLKVTAVVSPSTCDEVELNFTRENLNQHAKDINMSFELNVLSIESFNSPSCP 544
                     ************************************************************************************9999**99999 PP

            GRAS 193 eL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                      L ++  +Ea+aVn+ ++ ++ +      +s  ++vL++vk+l+Pkvvv  ++++d+ + s+   +++ l++ysal++sl+a    + +  +k+E
  XP_027336463.1 545 LLgQFFDNEAIAVNMPVSCFTNY------PSLFPSVLHFVKQLRPKVVVTLDRNCDRIDVSLPINVVHVLQCYSALLESLDAV-NVNLDVLQKIE 632
                     9966778**********999888......555568*********************************************665.3466999**** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     r++++++i++++   + +    +e+l  Wr+ + ++GF+p ++++ +++qa++l+++ +++g++ve +  sl+l+W++++L+svS Wr
  XP_027336463.1 633 RHFIQPAIKKIILGHQHS----QEKLPPWRNLFLQSGFSPFTFTNVTEAQAECLVQRAPVRGFHVERKPSSLILCWQRKELISVSTWR 716
                     *************99988....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MKAMPLPFEE FQGKGVLDFA SASDSFSLLL HHPQKWTIDK EDYCYVGTEC TSLLDSRRSP  60
SSLTCSSTMS SSLGSNNSNS KGGSGSANNT TVSAPTVSEN PPQESLETSP EKCGMRMEDW  120
EGQDQSILRL IMGDVEDPSA GLNKLLQSSG CASQSVDFNA GFGVVDQGLN NMVSDFDPSV  180
PGNYPGFPFI ENIDGQNAKA GSVSVSESIF SSSGNNPLMV SSSPGVFTSQ QQEFGVVDEK  240
PQVINPQFML NQNQVQFSEN PSFFVPLMYP PVQEQQVFSQ HQAKRPLFDP VGHNYQVPRL  300
PLLDSGQELF GRRQQTQLPL FPHHIQPSQQ QQTLVMPSAK PQKVSSTGED SNHQLQQAIF  360
DQLYKTAELI EAGNPVHAQG ILARLNHQLS PIGKPFQRAA FYMKEALMSL LHSNVQNLLA  420
FSPISFIFKI GAYKSFSEIS PVLQFANFTC NQALIEAVER FDRIHIIDFD IGFGVQWSSF  480
MQELALRNSG APSLKVTAVV SPSTCDEVEL NFTRENLNQH AKDINMSFEL NVLSIESFNS  540
PSCPLLGQFF DNEAIAVNMP VSCFTNYPSL FPSVLHFVKQ LRPKVVVTLD RNCDRIDVSL  600
PINVVHVLQC YSALLESLDA VNVNLDVLQK IERHFIQPAI KKIILGHQHS QEKLPPWRNL  660
FLQSGFSPFT FTNVTEAQAE CLVQRAPVRG FHVERKPSSL ILCWQRKELI SVSTWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-114GRAS family protein