PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336210.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

AP2

Protein Properties

Length: 577aa MW: 64088.3 Da PI: 6.6908

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.5	6e-12	254	310	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g XP_027336210.1 254 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 310 78*****************433.44555535555.779999************98 PP
2	AP2	48.1	2.9e-15	353	404	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_027336210.1 353 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 404 78**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MSNWLGFSLT PHLRIDEEFG RENQERGGGY PPPSSHPHPH PHPPSSHPHL SVMPLRSDGS 60 LCVSDSFRHS AAPEEWRYDN AIGGGNSNEE GPKLEDFLGC YSNSTMAESK VFCPDSQHDQ 120 NQNQNNISKI NVNVAPSFCT NAEIETGENL TNPSSLLHSF HAYNDSSHTL IPTNGMYKSW 180 LAQTQFSEGK PSPEANGCNF QSLSLTMSPS VQNGVGAIST VQVNEDNRKR VMAKSHAREP 240 VPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQGG YDKEEKAARA 300 YDLAALKYWG PTTHINFPLS TYEKELEEMK HMTRQEFVAN LRRKSSGFSR GASVYRGVTR 360 HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGTSAVTN FDISRYDVKR 420 ICSSSTLIAG DLAKRSPKDS AQVAAEDYNS CGSSTPQPPP MAITDGREHS DELSNMVWNA 480 SSDEQAQNEN GNIDNVTDPS QRVSPNKDAL NPQSPKCSVG LPPNEFAVSG ADYGHGYFTL 540 DGPKYDDGNN ENDHMNNNRL GNMGLVNQVP MFALWNE

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MSNWLGFSLT PHLRIDEEFG RENQERGGGY PPPSSHPHPH PHPPSSHPHL SVMPLRSDGS  60
LCVSDSFRHS AAPEEWRYDN AIGGGNSNEE GPKLEDFLGC YSNSTMAESK VFCPDSQHDQ  120
NQNQNNISKI NVNVAPSFCT NAEIETGENL TNPSSLLHSF HAYNDSSHTL IPTNGMYKSW  180
LAQTQFSEGK PSPEANGCNF QSLSLTMSPS VQNGVGAIST VQVNEDNRKR VMAKSHAREP  240
VPRKSIDTFG QRTSQYRGVT RHRWTGRYEA HLWDNSCRKE GQTRKGRQGG YDKEEKAARA  300
YDLAALKYWG PTTHINFPLS TYEKELEEMK HMTRQEFVAN LRRKSSGFSR GASVYRGVTR  360
HHQHGRWQAR IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGTSAVTN FDISRYDVKR  420
ICSSSTLIAG DLAKRSPKDS AQVAAEDYNS CGSSTPQPPP MAITDGREHS DELSNMVWNA  480
SSDEQAQNEN GNIDNVTDPS QRVSPNKDAL NPQSPKCSVG LPPNEFAVSG ADYGHGYFTL  540
DGPKYDDGNN ENDHMNNNRL GNMGLVNQVP MFALWNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-128	AP2 family protein