PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336099.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 569aa MW: 61731.5 Da PI: 6.6307

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28	3.8e-09	378	425	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_027336099.1 378 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 425 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MENQFFLNAG VPSQLHFEPS MPTWQSVSHS SAMDVQVTVL NCSPEQTQDC FFTPTWDKST 60 DHGVQFDSAL SSMVSSPAAS NSNMSNENFV IRELIGKLGN IGSSGEISPH SHPLVPASSY 120 INGNNSTNTS CYSTPLSSPP KMNMNRNNIP SVVNHLVKES MPSMGQSMAL NSSVAEFSAD 180 PGFAERAAKF SCFGSRSFNG RTNQLRMNNA ELAQRSASLV EHGKLPRVSS SPSLKMLGSQ 240 MGTQENKNSP LQDLMEVANS QDESTISEQI PNGDTVVKPS PYVNSRKRKT SSKGKAKETS 300 TSTNPPIAAE ASEDSNAKRS KPNESEGNEN GPVRAEDESK GGTSNAGDEK QNKSNSKPPE 360 PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK ALMLDEIINY 420 VQSLQRQVEF LSMKLASVNT RLDFSIESLI SKDIFQSNNS LAHPIFPLDS SASSFYGQHP 480 QPNPAIHTNI PNGTVTHSSV DPLDTALCQN LGIQLPPLNG FNEGGGSQYP ITFSEDDLHT 540 IVQMGFGQTA NRKTPIQPQS FNGSTQVPL

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MENQFFLNAG VPSQLHFEPS MPTWQSVSHS SAMDVQVTVL NCSPEQTQDC FFTPTWDKST  60
DHGVQFDSAL SSMVSSPAAS NSNMSNENFV IRELIGKLGN IGSSGEISPH SHPLVPASSY  120
INGNNSTNTS CYSTPLSSPP KMNMNRNNIP SVVNHLVKES MPSMGQSMAL NSSVAEFSAD  180
PGFAERAAKF SCFGSRSFNG RTNQLRMNNA ELAQRSASLV EHGKLPRVSS SPSLKMLGSQ  240
MGTQENKNSP LQDLMEVANS QDESTISEQI PNGDTVVKPS PYVNSRKRKT SSKGKAKETS  300
TSTNPPIAAE ASEDSNAKRS KPNESEGNEN GPVRAEDESK GGTSNAGDEK QNKSNSKPPE  360
PPKDYIHVRA RRGQATDSHS LAERVRREKI SERMKLLQDL VPGCNKVTGK ALMLDEIINY  420
VQSLQRQVEF LSMKLASVNT RLDFSIESLI SKDIFQSNNS LAHPIFPLDS SASSFYGQHP  480
QPNPAIHTNI PNGTVTHSSV DPLDTALCQN LGIQLPPLNG FNEGGGSQYP ITFSEDDLHT  540
IVQMGFGQTA NRKTPIQPQS FNGSTQVPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	285	290	SRKRKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-110	bHLH family protein