PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027336063.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

HSF

Protein Properties

Length: 478aa MW: 53855.6 Da PI: 5.5411

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027336063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.2	6.3e-34	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl k+ye+++d++++e++sws++++sf+v+++++f++ +Lp++Fkh+nf+SF+RQLn+YgF+kv+ e+ weF+++ F k++k+ l++ XP_027336063.1 15 FLLKTYEMVDDSSTEEIVSWSSTNDSFIVWNPSDFSRLLLPTFFKHNNFSSFIRQLNTYGFRKVHPER---------WEFANEDFVKDQKHRLKN 100 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 i+r+k XP_027336063.1 101 IHRRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MEGSGSGSGS GPAPFLLKTY EMVDDSSTEE IVSWSSTNDS FIVWNPSDFS RLLLPTFFKH 60 NNFSSFIRQL NTYGFRKVHP ERWEFANEDF VKDQKHRLKN IHRRKPIHSH THPPGSVVDP 120 ERSAFEEQIE KLSHHKTTIE SNIFRFKQHH SAAKGHLEDL RQRLDAMEKR QKYLLNFFEK 180 ALQNPTFVER ISRKIESMDL LAYNKKRRLP QLDDHHLQPV SDSNGMEFRN ISHQDFTNKL 240 TLELSPTPTV SDINLVSCST HSSNEDGESP HKMLSEGEPI QLHTTTFAPE TAIELAEENG 300 ASFTFIDSCL SRAATATECP KANSLEPNCE EDDSYISCLL NLTLASSPLQ VKRNSCPDRS 360 PHIDCQEIVG KLAESKFCAN DDKDSDVGAS SSRNLTNEVT NLASSHETPT PSNNQGTPSA 420 PVRVNDVFWE QFLTERPGCS DNEEPMPNYK ANAYAEQDEG RSLCGISGNV VNMDHLTL

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MEGSGSGSGS GPAPFLLKTY EMVDDSSTEE IVSWSSTNDS FIVWNPSDFS RLLLPTFFKH  60
NNFSSFIRQL NTYGFRKVHP ERWEFANEDF VKDQKHRLKN IHRRKPIHSH THPPGSVVDP  120
ERSAFEEQIE KLSHHKTTIE SNIFRFKQHH SAAKGHLEDL RQRLDAMEKR QKYLLNFFEK  180
ALQNPTFVER ISRKIESMDL LAYNKKRRLP QLDDHHLQPV SDSNGMEFRN ISHQDFTNKL  240
TLELSPTPTV SDINLVSCST HSSNEDGESP HKMLSEGEPI QLHTTTFAPE TAIELAEENG  300
ASFTFIDSCL SRAATATECP KANSLEPNCE EDDSYISCLL NLTLASSPLQ VKRNSCPDRS  360
PHIDCQEIVG KLAESKFCAN DDKDSDVGAS SSRNLTNEVT NLASSHETPT PSNNQGTPSA  420
PVRVNDVFWE QFLTERPGCS DNEEPMPNYK ANAYAEQDEG RSLCGISGNV VNMDHLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13980.1	1e-144	HSF family protein