PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336050.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 486aa    MW: 55214.4 Da    PI: 6.9487
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS323.44.4e-991304853374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++L++ Ae +++g+   aq +Larl+++ sp g+p+qR+a+y++eAL + l++   ++ + l+ s+ s    + ++ a+  fse+sP+l+fs++t
  XP_027336050.1 130 DQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHS---NVQNLLAFSPIS---FVFKIGAYMSFSEISPVLQFSNFT 218
                     689*************************************************9...666666777776...99********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                      Nqa+ eave+ +r+HiiDfdi+ G+QW +L+q+La R++g psl+iT+++sp++ ++ el+ t+e+L+++A+ +++ fe nvl  +   +l++ 
  XP_027336050.1 219 SNQALIEAVERFDRIHIIDFDIGFGVQWSSLMQELALRSSGVPSLKITAIVSPSTCDEVELNVTQENLNQYAKDINMAFELNVLSIE---SLNTP 310
                     ***********************************************************************************9555...44444 PP

            GRAS 193 eL....rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +     ++ ++Ea+aVn+ l+ ++ +      +s  ++vL++vk+l+Pkvvv  ++++d+ + +F++ +++al++ysal++sl+a    + +  +
  XP_027336050.1 311 SCplsgQFYENEAIAVNMPLSCFTNY------PSLFPSVLRFVKQLRPKVVVTLDRNCDRFDVPFATNVVHALHCYSALLESLDAV-NVNLDVLQ 398
                     4322447778**********999888......555568*********************************************665.3466999* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     k+E++++ ++i++++   + +    +e+l  Wr+++ + GF+p ++s+++++qa++l+++ + +g+++e ++ slvl+W++++Lv+vS Wr
  XP_027336050.1 399 KIEKHFVLPAIKKIIIGHQHS----QEKLPPWRNMFLQYGFSPSTFSNSTETQAECLVQRAPIRGFQLERKHSSLVLCWQRKELVTVSTWR 485
                     ***************999888....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MVTMQHQVVG EVDEKPQVIN PQFMLNHNQV QFTENPSFFV PMMYPQVQEQ QVVSQHQAKR  60
PLYDTVGLNY QVPRLPLLDS GQELFGRRQQ MQLPLFPHHV QPQVVPSAKQ QKVSSTGEDS  120
SHQLQQAIFD QLYKTAELIE AGNPVHAQGI LARLNHQLSP IGKPFQRAAF YMKEALMSLL  180
HSNVQNLLAF SPISFVFKIG AYMSFSEISP VLQFSNFTSN QALIEAVERF DRIHIIDFDI  240
GFGVQWSSLM QELALRSSGV PSLKITAIVS PSTCDEVELN VTQENLNQYA KDINMAFELN  300
VLSIESLNTP SCPLSGQFYE NEAIAVNMPL SCFTNYPSLF PSVLRFVKQL RPKVVVTLDR  360
NCDRFDVPFA TNVVHALHCY SALLESLDAV NVNLDVLQKI EKHFVLPAIK KIIIGHQHSQ  420
EKLPPWRNMF LQYGFSPSTF SNSTETQAEC LVQRAPIRGF QLERKHSSLV LCWQRKELVT  480
VSTWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-121GRAS family protein