PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027336048.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family GRAS
Protein Properties Length: 606aa    MW: 67583.8 Da    PI: 6.2362
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027336048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS322.58.6e-992506053374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++L++ Ae +++g+   aq +Larl+++ sp g+p+qR+a+y++eAL + l++   ++ + l+ s+ s    + ++ a+  fse+sP+l+fs++t
  XP_027336048.1 250 DQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALMSLLHS---NVQNLLAFSPIS---FVFKIGAYMSFSEISPVLQFSNFT 338
                     689*************************************************9...666666777776...99********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                      Nqa+ eave+ +r+HiiDfdi+ G+QW +L+q+La R++g psl+iT+++sp++ ++ el+ t+e+L+++A+ +++ fe nvl  +   +l++ 
  XP_027336048.1 339 SNQALIEAVERFDRIHIIDFDIGFGVQWSSLMQELALRSSGVPSLKITAIVSPSTCDEVELNVTQENLNQYAKDINMAFELNVLSIE---SLNTP 430
                     ***********************************************************************************9555...44444 PP

            GRAS 193 eL....rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +     ++ ++Ea+aVn+ l+ ++ +      +s  ++vL++vk+l+Pkvvv  ++++d+ + +F++ +++al++ysal++sl+a    + +  +
  XP_027336048.1 431 SCplsgQFYENEAIAVNMPLSCFTNY------PSLFPSVLRFVKQLRPKVVVTLDRNCDRFDVPFATNVVHALHCYSALLESLDAV-NVNLDVLQ 518
                     4322447778**********999888......555568*********************************************665.3466999* PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     k+E++++ ++i++++   + +    +e+l  Wr+++ + GF+p ++s+++++qa++l+++ + +g+++e ++ slvl+W++++Lv+vS Wr
  XP_027336048.1 519 KIEKHFVLPAIKKIIIGHQHS----QEKLPPWRNMFLQYGFSPSTFSNSTETQAECLVQRAPIRGFQLERKHSSLVLCWQRKELVTVSTWR 605
                     ***************999888....9****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MKAMPFPFEE FQGKGVLDFS SASDSFSLLL HNPQKWTKDK EDYCYVGTEP TSVLDSRRSP  60
NSSTMSSSLG SSNTISKGGS GGSTNNTTGY TPTVSQNPRQ PALETTIEKC GMRMEDWEAQ  120
DQSIMRLIMG DVEDHSGGLS KLFQNNGCGS QSVDFNGGFG VVDQGLNMVS FIDPSVPGNY  180
PGFPFMAENY QVPRLPLLDS GQELFGRRQQ MQLPLFPHHV QPQVVPSAKQ QKVSSTGEDS  240
SHQLQQAIFD QLYKTAELIE AGNPVHAQGI LARLNHQLSP IGKPFQRAAF YMKEALMSLL  300
HSNVQNLLAF SPISFVFKIG AYMSFSEISP VLQFSNFTSN QALIEAVERF DRIHIIDFDI  360
GFGVQWSSLM QELALRSSGV PSLKITAIVS PSTCDEVELN VTQENLNQYA KDINMAFELN  420
VLSIESLNTP SCPLSGQFYE NEAIAVNMPL SCFTNYPSLF PSVLRFVKQL RPKVVVTLDR  480
NCDRFDVPFA TNVVHALHCY SALLESLDAV NVNLDVLQKI EKHFVLPAIK KIIIGHQHSQ  540
EKLPPWRNMF LQYGFSPSTF SNSTETQAEC LVQRAPIRGF QLERKHSSLV LCWQRKELVT  600
VSTWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-129GRAS family protein