PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335928.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 626aa    MW: 69745.5 Da    PI: 6.6422
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B376.23.7e-2476176198
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f kvlt sd++++g +++ +k+a+e+     +++++ +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++
  XP_027335928.1  76 FSKVLTASDTSTHGGFSVLRKHATEClpaldMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFL--RGDNG 168
                     88****************************977777888*************************************************..34899 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     el+v+v+r
  XP_027335928.1 169 ELRVGVRR 176
                     99****98 PP
2Auxin_resp96.83.2e-32202283183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsse..rrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha++t++ F v+Y+Pr+  s+F++ v+k+++a+++kv vGmRfkm+fe++ds+e  rr+sGt+vgv+d++p +W nSkWrsLk
  XP_027335928.1 202 ASHAVATQTLFVVYYKPRT--SQFIIAVNKYLEAMDNKVGVGMRFKMRFEGDDSAEtdRRFSGTIVGVEDISP-HWINSKWRSLK 283
                     789***************6..9********************************8744788**********99.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 626 aa     Download sequence    
MEQLEASTNQ ELNQRIPLLK LPTKILCRVV NVHLLAEQET DEVYAQITLV PESNQDEPTS  60
PDPCTTELPR PPVHSFSKVL TASDTSTHGG FSVLRKHATE CLPALDMSQP TPTQELVAKD  120
LHGYEWRFKH IFRGQPRRHL LTTGWSTFVT SKRLVAGDTF VFLRGDNGEL RVGVRRLSRQ  180
ASSMPSSVIS SQSMHLGVLA TASHAVATQT LFVVYYKPRT SQFIIAVNKY LEAMDNKVGV  240
GMRFKMRFEG DDSAETDRRF SGTIVGVEDI SPHWINSKWR SLKVQWDEPS AVPRPDRVSP  300
WEIEPFVASS STPSVQPTAV KTKRARPTSE IPDVDTTSAA SVYWDAGLKQ VDMTQLNVLA  360
ESKRSDSTGM WHHKQADMNS KSNCSGTMLR NQTEGSWLSS PHSSCLSHLF QDATDDKSAS  420
AWPVSKPNSS RLNNDNVFDQ VDKENKVENA MSYRLFGIDL IDHSRNSPAV EKASTHAVNA  480
PRIIADGCAS TLSRTDTGHK SDASPKESQS KQICRSRTKV QMQGVAVGRA VDLTMLDGYD  540
QLIHELEDMF DIKGQLKHRN KWEIVFTDDE GDMMLVGDDP WPEFCNMVRR IFICSSQDVK  600
KMSSGSKLPI SSVEEGTVIS SDTTET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein