PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027335834.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 308aa    MW: 35675.1 Da    PI: 8.0867
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027335834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding248.8e-082671346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                      WT eE +++  a + + ++   +W ++a++++ g+t  +++  ++ 
   XP_027335834.1 26 EWTREENKKFESALAIYDKDtpdRWVRVAAMLP-GKTVFDVIKQYRE 71
                     7********************************.****999999875 PP
2Myb_DNA-binding39.71.1e-12126170347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ +  ++G+g+W+ I+r +  ++t+ q+ s+ qky
   XP_027335834.1 126 PWTEEEHRRFLMGLLKYGKGDWRNISRNFVFTKTPTQVASHAQKY 170
                      8*****************************889***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MEFETIYPSC FMSNSNWFVQ ESHSTEWTRE ENKKFESALA IYDKDTPDRW VRVAAMLPGK  60
TVFDVIKQYR ELEEDVSEIE AGRVPVPGYP TSSFTLELVY NQSYDGCRKR PNTVRSSDQE  120
RKKGVPWTEE EHRRFLMGLL KYGKGDWRNI SRNFVFTKTP TQVASHAQKY YIRQKLSGGK  180
DNKRRPSIHD ITIVNLTETS QTTTSDQEKP LLFIESHKPS QQQKLTSMPK VQLEWINHHN  240
DGSLMVFNPN YDMFMSSSSG ISTKTLKFQG QDIYECAFHE TYAKLKSPGF RTASSEFNTE  300
AIFGIHAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-93MYB family protein