PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027335762.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 527aa MW: 59252.4 Da PI: 5.0332

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027335762.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.7e-11	476	525	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 + +WT E+e l +vk++G g+W++I + ++R++ ++k++w++ XP_027335762.1 476 KRKWTSLEEETLRAGVKMFGEGNWASIRNFYSnifENRSGVDLKDKWRNM 525 579*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MKPEKMDPDI SRWVLEFLLR SSVPDSLIQK SLTVLPLSAA DSRLKKTLLL RTLQSLLLKA 60 SLSETTLQIF ELLEDLNRND SVPVTDSMRR AYCAVAVECT VKYLAASSDD PAGEYFDAVR 120 RIWRGRVAGM GVEGRRSELV SGELSQWGED IEAALWDPRV CERLASLNSR REALKEVRGF 180 LEEAWEMMGP SFLDSVGALS KGKGLCPEGV CEIALSVEAL RKREGELEGS RKEKKESFGG 240 GGGDRSDDSD DDDDDDNNDN DDHDRDGGGG GASDDGACME GVAVQDENQG KEPLEERVVL 300 PAQRYKVQKG NPQLKRKHSA LRTCNRGVKI SDPEEVEPAN MWSHYKYDPV STAEVRRVRE 360 SLKSSSFELR SLVKDPLPDA LHMSEVVRSK LATEDTNFEP LVENQSEDVY VPNPDVCKSI 420 VPFQPKNDTN LGKKSSVRSS NACHPNLMER RSNARTFEWD DSMDNLPQGK QPRRRKRKWT 480 SLEEETLRAG VKMFGEGNWA SIRNFYSNIF ENRSGVDLKD KWRNMIR

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MKPEKMDPDI SRWVLEFLLR SSVPDSLIQK SLTVLPLSAA DSRLKKTLLL RTLQSLLLKA  60
SLSETTLQIF ELLEDLNRND SVPVTDSMRR AYCAVAVECT VKYLAASSDD PAGEYFDAVR  120
RIWRGRVAGM GVEGRRSELV SGELSQWGED IEAALWDPRV CERLASLNSR REALKEVRGF  180
LEEAWEMMGP SFLDSVGALS KGKGLCPEGV CEIALSVEAL RKREGELEGS RKEKKESFGG  240
GGGDRSDDSD DDDDDDNNDN DDHDRDGGGG GASDDGACME GVAVQDENQG KEPLEERVVL  300
PAQRYKVQKG NPQLKRKHSA LRTCNRGVKI SDPEEVEPAN MWSHYKYDPV STAEVRRVRE  360
SLKSSSFELR SLVKDPLPDA LHMSEVVRSK LATEDTNFEP LVENQSEDVY VPNPDVCKSI  420
VPFQPKNDTN LGKKSSVRSS NACHPNLMER RSNARTFEWD DSMDNLPQGK QPRRRKRKWT  480
SLEEETLRAG VKMFGEGNWA SIRNFYSNIF ENRSGVDLKD KWRNMIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	470	476	KQPRRRK
2	472	476	PRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	4e-15	MYB_related family protein